Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3232 102 1e-16 >seq3232 Length=25038 Score = 102 bits (112), Expect = 1e-16 Identities = 163/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || ||||||| || || ||||| ||| || | | || |||||||||| Sbjct 5007 CTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 4949 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTT-TGCTCACGTTG 203956 | ||||| || || || ||| ||||| | |||||| || | || | ||| ||| | Sbjct 4948 CCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGTGCCATCGTCG 4889 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || ||| | | ||| ||||| || || || ||||||||| |||||||| ||||| || Sbjct 4888 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCGCCTCGATCGGC 4831 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || || |||||| ||||| ||||| | |||||| || |||||| Sbjct 4830 CGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 4785 Score = 96.9 bits (106), Expect = 6e-15 Identities = 344/529 (65%), Gaps = 14/529 (3%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||||||||| ||| ||||| || | | || |||||||| || | | | || Sbjct 3552 CTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACCTCCTC 3493 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | ||| |||||||| ||||| | Sbjct 3492 CTTGCCGTGGTTCTTGCGAAGGTCCAG-GAACTCGAAGACGTCAGCGTGCCATGGCTCGA 3434 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 3433 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 3374 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | |||||||||| | |||| Sbjct 3373 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGT 3314 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 3313 AAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 3254 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| |||| || |||||| || || Sbjct 3253 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTTCATGGTG 3195 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | ||||| | |||| || || || || |||| ||||||||| || Sbjct 3194 ACCAGGAAACACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 3136 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637 ||||||| | ||| | ||||| ||| |||| | || || |||| ||| | Sbjct 3135 GGCGTGGGTAAAG----TAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTCGA 3080 Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 ||| ||||| || || | ||||| | ||||| | |||||| || Sbjct 3079 TGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGG 3031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795118175586000