Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2014 340 2e-88 seq2453 170 2e-37 seq2336 141 1e-28 seq1898 105 8e-18 seq2960 95.1 2e-14 >seq2014 Length=69972 Score = 340 bits (376), Expect = 2e-88 Identities = 651/959 (68%), Gaps = 3/959 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | |||||| || ||||| | || ||||| || || |||||||||||||| Sbjct 47959 TCACCGGTGAGGATGGCAGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 47900 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||| | || | ||||| | | || || | || ||| Sbjct 47899 ATGGACTTGTTAGGCTCCTTGCCGCTGAAGAAGTCCGAGACGAGTTTCTGGACCTTGGGG 47840 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || | || |||||||| ||| Sbjct 47839 ATACGAGTGGACCCACCGACGAGGACGATCTCGTGGACAGAGGCCTTGTCGATCTTGGAG 47780 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 47779 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 47720 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || ||||| || || || ||||| || | || ||| | | ||| || || Sbjct 47719 TCGAAGCGGGCGCGGGTGATAGAGGTGTAGAAGTCGATACCCTCGAAAAGCGAGTCGATC 47660 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 47659 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGG 47600 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 47599 AGACGACGGAGAGCACGGGCGTTCGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 47540 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 47539 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 47480 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 47479 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGACACATCGAACGTT 47420 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 47419 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTCTTGTCGAGGCCG 47360 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || || || ||||| || ||| || || | || Sbjct 47359 TAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTTAGACCCGAGATG 47300 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 47299 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 47240 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || || | || ||||| ||| || Sbjct 47239 ACAGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCAGTCTCCTTCATCTTGAGCAGG 47180 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | ||||| || || || || | || || || Sbjct 47179 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTCG 47120 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || ||||| || | | | || |||||| | | ||| | ||||| ||| Sbjct 47119 ATGATGGGCTT---GGTTCCCTTGTCGACAACCTTGAAGGGCCAGTGCTTCATGTCGGAC 47063 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || || ||||| ||||| || || ||||| Sbjct 47062 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 47004 >seq2453 Length=139334 Score = 170 bits (188), Expect = 2e-37 Identities = 526/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Plus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 44644 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 44703 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | ||| || || ||||| Sbjct 44704 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAGACGAGCGATTGGATCTTGGGGAT 44763 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 44764 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 44823 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 44824 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 44882 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||| | || || | |||| || || | | | | ||| || | | Sbjct 44883 CGAAGCGGGCACGCGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 44942 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 44943 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 45002 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 45003 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 45062 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | || || || |||||||||||||| || || || Sbjct 45063 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 45120 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 45121 GGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 45180 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 45181 TCCTCCTCCGAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 45240 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | |||||||||| ||||| || || || || || || || || ||||| || || || Sbjct 45241 ACCGAGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 45300 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 45301 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 45360 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 45361 GACGGTAACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 45420 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| || ||||| || || ||||| Sbjct 45421 CTTGGAGAGGACCATGGACGAGATCTC 45447 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 45701 CTTGGCCGAGTCGCCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 45757 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 45758 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 45817 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 45818 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 45850 >seq2336 Length=41453 Score = 141 bits (156), Expect = 1e-28 Identities = 228/327 (70%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || || ||||||| ||| Sbjct 35624 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAATACCTCAAAGACACCG 35565 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 35564 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCCCCCCCGAGATCGTAGACGATGATG 35505 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 35504 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 35448 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| ||| || || || || || || | || || || |||||||||||| Sbjct 35447 TTAACGACACGGAGAACATTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 35388 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 35387 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 35328 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 35327 TAGGCCTCGGCGGTCTCCTTCATCTTG 35301 >seq1898 Length=50208 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||| ||||||| ||||| || || || || || || | ||| || || || Sbjct 10269 TCGAGACCATACGCGAGGGCCGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 10210 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || || | || || || ||||||||||| ||||| ||||| |||||||| || Sbjct 10209 CCAGCGATCGTACCGGCGTCCTTGGTCGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGA 10150 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 10149 ACGGTGACGACGGCGTGCTTGACCGACTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 10090 Query 7781 TTG 7783 ||| Sbjct 10089 TTG 10087 >seq2960 Length=54936 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 ||||| || || || || || ||| | ||||| || || ||||| || ||| || Sbjct 33890 TTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCCGAG 33949 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | ||||| || ||||| ||||| || || || || || || ||| | | ||| | Sbjct 33950 ACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 34009 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| || || |||||||||| Sbjct 34010 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAACCA 34068 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | ||| || || | || || | | | |||||| | Sbjct 34069 CGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATTTCCCGAGCTGTCGCCGA 34128 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || ||||| Sbjct 34129 GATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTGATTG 34188 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||| ||||| | ||||||||| || | || ||||| | || || Sbjct 34189 GGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 34248 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 34249 CGACTTTGT 34257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635103226629000