Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1695 82.4 9e-11 >seq1695 Length=206671 Score = 82.4 bits (90), Expect = 9e-11 Identities = 238/359 (66%), Gaps = 12/359 (3%) Strand=Plus/Plus Query 168241 TTGAGAATGAGACCCTTGATATGGCTTCCATCATTATCTGCGTCTGTCATGATCATGAGA 168300 |||| || ||||||||||| || |||||| | ||| || | |||||||||||| Sbjct 118562 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 118621 Query 168301 CGACCATAACGAAGTTCGGAAACATCTTTGTACTCCTTTCCTTGTTGAAGTCCCAAAATT 168360 || ||||| || | || || |||| | || || || || | ||||| || Sbjct 118622 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATC 118681 Query 168361 TTCTTGAGATCATTGAA-CTCCTGATTA--GATGTCAACTGTGCCACCGATGAGTCCCTC 168417 | ||||| | ||||| ||| |||| || | || ||| ||| | || | | Sbjct 118682 TGCTTGATCGC-TTGAATCTCGACATTATCGAGGAGGGCTTTGC--CCGCCGCTTCACGC 118738 Query 168418 ACGTTTTTACACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAG 168477 ||||| |||| || || | || || || ||||| | |||| ||| ||||||| Sbjct 118739 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACGGCC 118798 Query 168478 AGACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTT 168537 ||||| | || ||||| | || || ||||| || || |||| |||||| || ||||| Sbjct 118799 AGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTT- 118857 Query 168538 CCAGA-CTGTGC--CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGAT 168593 || | || | ||| ||||| ||||| ||||| || | ||| || ||| ||||| Sbjct 118858 --GGATCCGTTCCTCGTTCCAGCGTTGTTTGCATCCTCGAGCTTGACGAGACCCGTGAT 118914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588948575805000