Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1957 159 3e-34 >seq1957 Length=81828 Score = 159 bits (176), Expect = 3e-34 Identities = 241/340 (71%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104 ||||||||| || | || |||||| | ||| || ||||| | | |||| | || Sbjct 77088 GGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAC 77029 Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30163 || | || |||||| |||||| |||| || || || | |||| | |||| Sbjct 77028 AGCCTGCATCAACTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCCGTCC-TATACT 76970 Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30223 |||| ||||| ||||||||||||||||| || |||||||||| || ||||||||||| | Sbjct 76969 CTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTAT 76910 Query 30224 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283 || | || || |||||||| ||| ||||| || || || | ||||| ||||| |||| Sbjct 76909 GCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGACCC 76850 Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 |||| ||||| | ||| || | || || |||| |||||||| || || ||||| | Sbjct 76849 CCTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGA 76790 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 || | | ||||||| ||||||| || | ||||| Sbjct 76789 TGATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 76750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408599049399425