Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2027 120 2e-22 seq2102 102 6e-17 >seq2027 Length=89189 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | |||| || Sbjct 8845 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCCTCG 8786 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | ||| ||||| || || |||||||| || ||||| ||| Sbjct 8785 AGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGA 8726 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||||| | || | ||||| || | || || ||||| |||| ||| ||| Sbjct 8725 ATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTG 8666 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| || || ||||| || ||||| Sbjct 8665 CCGGTTAAGGTCTTGACAAAGATTTGCAT 8637 >seq2102 Length=107014 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || |||||||| |||| || | | |||| || Sbjct 67735 ACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 67794 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || || || ||||||||||| || |||||| Sbjct 67795 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 67854 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | ||||| || | || || || || |||| ||| ||| Sbjct 67855 ATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTG 67914 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 67915 CCCGTAAGCGTCTTGACGAAGATTTGCAT 67943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396260409579825