Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3232 167 4e-36 >seq3232 Length=25038 Score = 167 bits (184), Expect = 4e-36 Identities = 787/1236 (64%), Gaps = 42/1236 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || |||| | ||||| Sbjct 4169 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 4110 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAG 213310 ||||| ||||| || || ||| |||||| || || || ||| | || || || Sbjct 4109 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAACGCCATG-AACGCGTCGGCGAG 4051 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCA 213369 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 4050 ACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCGATGA 3992 Query 213370 AGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACAT 213429 ||| || ||||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 3991 CGGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCT 3932 Query 213430 GGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCG 213488 | || | || | || |||| | |||| || | || ||| |||| ||| Sbjct 3931 CGTGCAACTTCT------TAAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCG 3879 Query 213489 ATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTG 213548 || ||||| |||||| ||||| ||| | | | | |||||| |||||||||||| Sbjct 3878 ATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTG 3819 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA 213608 |||| ||| | ||| ||||| ||||||| ||||| || ||| ||| || | Sbjct 3818 CACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCG 3759 Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668 ||||||||||||||| | ||| ||||| || | ||||| | || ||| | ||| Sbjct 3758 TCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAA 3699 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCG 213725 || | || || | | | || | ||| | | || ||||| | ||| Sbjct 3698 AGCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCG 3645 Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGA 213782 | | || ||| || | ||| |||| || || || || || | ||||| Sbjct 3644 AACAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCAGCGGGG 3588 Query 213783 CACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCAC 213842 || | |||| ||| || | | | | ||| | || ||| ||||| || || | ||| Sbjct 3587 CAGAAGAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAG 3528 Query 213843 AGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCT 213902 ||||| ||| || || | | | ||| ||| || ||| ||||| || || Sbjct 3527 AGCGCAAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 3468 Query 213903 AGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GC 213959 || || || |||| ||| |||||||| ||||| | |||||| || ||||| || | || Sbjct 3467 AGGAACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 3408 Query 213960 CTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACC 214019 | ||||| || ||||| || | || ||||| ||| || || | ||| || Sbjct 3407 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACG 3348 Query 214020 AGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTC 214079 | ||||| || | ||||| || || || || || ||||||| || | | |||| Sbjct 3347 ATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGG 3288 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 ||| | || || ||||||||| ||||||||| | ||||| | | | || || Sbjct 3287 ATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 3228 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 |||||| | || ||| || | | | | | || ||| || ||| ||||| || Sbjct 3227 TAGATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGG 3168 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAG 214256 | || || | |||||| ||||| || ||| ||| |||| | | | || Sbjct 3167 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCGGAC 3111 Query 214257 AGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC 214316 | ||| |||| | || || ||| ||||||||| |||||| | ||| Sbjct 3110 ATGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACG 3051 Query 214317 CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAG 214373 | ||| |||||||| || || | || || | ||| | | || |||| |||| Sbjct 3050 CGCATGAGCATGTGTTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAG 2994 Query 214374 GAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 |||||||| || |||||||| ||||||||| |||| Sbjct 2993 GAGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 2958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931489425504000