Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq2102 89.7 3e-12
>seq2102
Length=107014
Score = 89.7 bits (98), Expect = 3e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || | || || || || || || || ||||| || || ||
Sbjct 67950 ACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGT 68009
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| || ||||| || ||||||||||| || || ||||| ||
Sbjct 68010 GCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACC 68069
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||||||||||| ||||| |||||| ||||| || || | | || ||
Sbjct 68070 CTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAG 68129
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || || || || ||||| ||||| |||||
Sbjct 68130 GGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTG 68168
Score = 87.8 bits (96), Expect = 1e-11
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| || || || | | ||| || || ||||| || ||||| || |||||||||
Sbjct 68221 TTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGT 68280
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| || ||||||||||| ||||| |||||| ||||| || ||
Sbjct 68281 TGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCC 68340
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | || ||||| || || || ||||| | ||||| ||||| |||||
Sbjct 68341 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTG 68396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268019416676300
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |