Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3232 152 6e-32 seq2960 140 4e-28 seq2953 118 1e-21 >seq3232 Length=25038 Score = 152 bits (168), Expect = 6e-32 Identities = 549/856 (64%), Gaps = 11/856 (1%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| ||||| ||||||||||||| | ||||| || || Sbjct 3030 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 3089 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| || | ||| || |||||| | | || | ||||| | || || ||||| Sbjct 3090 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 3149 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || || ||||| || ||| ||||| || Sbjct 3150 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGA 3209 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 3210 CTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 3269 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || || |||||| | | | || | ||| || || || || Sbjct 3270 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAA 3329 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || | || | || || | || ||||| || || | ||| ||| |||||||| || Sbjct 3330 CGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 3389 Query 75571 AAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || ||||| | || || ||||| ||||| | || |||||||| Sbjct 3390 CGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGCA 3446 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || || || | |||||||| || | || ||||| || | || |||| || Sbjct 3447 CGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 3506 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | |||||||| | | || |||||||| || || || ||| |||| || |||| | Sbjct 3507 TCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGC 3566 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 | | ||| | || ||||| || | | || || || ||| ||| | || || Sbjct 3567 CAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGA 3626 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| ||| | | | || || ||| ||||||| | ||||| ||| | || Sbjct 3627 AGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCC 3686 Query 75865 AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 || || | | ||||| | || ||||| || | ||| || || || | || | | Sbjct 3687 CGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCA 3745 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||| |||||||| || ||||| || ||||||||||| | || || |||||| Sbjct 3746 TGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGT 3805 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 || || | ||||| || || | |||||| | | |||||| || || |||| Sbjct 3806 CGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCA 3865 Query 76044 ATTTGGCATCAATCGC 76059 | ||||| || ||||| Sbjct 3866 ACTTGGCCTCGATCGC 3881 >seq2960 Length=54936 Score = 140 bits (154), Expect = 4e-28 Identities = 275/407 (68%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || || |||| | | || | ||| ||||| |||||||||| ||| | || || | Sbjct 34299 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGGGTG 34240 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| | |||||| | || || ||||| || || ||||| || | Sbjct 34239 TCTTGCTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGC 34180 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | ||| ||||| | |||| | || | ||| | || | ||| Sbjct 34179 TTGGCCTCCATGTTGCCGAGGTAAAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 34120 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798 | | ||||||| | ||||||||| | ||| || | ||| || ||||||||||| Sbjct 34119 GCTCGGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 34060 Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858 | ||| ||| |||||| ||||| | || || || ||||| || ||||||| |||| Sbjct 34059 AAGATGCCGTTGCAGGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 34000 Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 ||| ||| |||| ||| || || || || ||||||||||||||| ||| | ||| Sbjct 33999 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGTGTCGTCTCGGATTGA 33940 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || ||||| ||| || || ||| ||| || || ||||||||||| Sbjct 33939 GGGGTTTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 33893 >seq2953 Length=106328 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||||||| | || || | || || ||||||||||||||||| ||| Sbjct 86478 ATCTTTCTGGTGACAAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 86419 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| || || || || ||||| || ||||||| |||| ||| || Sbjct 86418 TTGCACGCGTACATGCCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAGC 86359 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 86358 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 86299 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||||||||| Sbjct 86298 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCTTGGTA 86261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596541822228000