Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2014 363 2e-95 seq2638 206 3e-48 seq2102 199 5e-46 seq2237 187 3e-42 seq2027 187 3e-42 seq2336 111 2e-19 >seq2014 Length=69972 Score = 363 bits (402), Expect = 2e-95 Identities = 928/1405 (66%), Gaps = 13/1405 (1%) Strand=Plus/Plus Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535 || || ||||| || || ||||| || ||||| || |||| | ||| | ||||| Sbjct 47004 AACACCGTCTTCGATGCCAAGCGACTCATTGGCCGAAAGTGGGCCGATCCCGAGGTCCAG 47063 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATT 195595 ||| || ||| ||||| | | | ||||| || || ||||| || || Sbjct 47064 TCCGACATGAAGCACTGGCCCTTCAAGGTTGT---CGACAAGGGAACCAAGCCCATCATC 47120 Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 | || || | | || |||| || || || | ||||| ||||| ||||| ||| | Sbjct 47121 GAGGTCGAGTACCGAGGCGAGACCAAGCAGTTCACCCCCGAGGAAATCTCGTCCATGATC 47180 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 || | ||||||||||||||||| || | | | | || | || || | || || Sbjct 47181 CTGCTCAAGATGAAGGAGACTGCTGAGGCCTACCTCGGCACGACCGTCTCCAACGCTGTC 47240 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 || ||||| || || ||||||| || || || ||||| || || ||||| || | || Sbjct 47241 GTCACTGTCCCCGCCTACTTCAACGACTCGCAGCGACAAGCCACCAAGGATGCCGGTGTC 47300 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 || ||||||||||| || | || ||||| || || || || || || || ||||| Sbjct 47301 ATCTCGGGTCTAAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCTTAC 47360 Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || || |||||||| | || || || || || || | ||||| |||||||| || || Sbjct 47361 GGCCTCGACAAGAAGACGGTCGGCGAGAAGAACGTCCTCATCTTCGATCTCGGAGGAGGA 47420 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 ||||| ||||| || ||| | | || || | ||||| ||||| || ||||| || || Sbjct 47421 ACGTTCGATGTGTCCCTTTTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCC 47480 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT-GTCTGA 196014 ||||| || || | || ||||| || ||||| || || || || || ||| | Sbjct 47481 GGTGACACCCACTTGGGAGGTGAGGACTTCGACAACCGACTCGTCACCCACTTCGTC-GC 47539 Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTC-TGGAAATCCTAGGGCTCTTCGTCGGC 196073 |||||| || ||||| ||||| ||| | || | ||| || | ||||| ||||| | Sbjct 47540 CGAGTTCAAGCGCAAGAACAAGAAGGATCTCTCGTCGAACGCCC-GTGCTCTCCGTCGTC 47598 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 | | || || || || |||||||| || || || ||||| | || || || | | | Sbjct 47599 TCCGCACCGCCTGCGAGCGTGCCAAGCGCACCCTTTCTTCGGCCGCCCAGACCACCATCG 47658 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 |||| || ||| | || || || || |||||||| || |||| ||||| || || || | Sbjct 47659 AGATCGACTCGCTTTTCGAGGGTATCGACTTCTACACCTCTATCACCCGCGCCCGCTTCG 47718 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||||| | || ||||| | ||||| || || || | || || || | Sbjct 47719 AGGAGTTGTGCCAAGACTTGTTCCGTGGCACCATGGACCCCGTCGAGAAGGTCCTCCGCG 47778 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 || | ||||| || ||| | || | || || ||||| || || || || || |||| Sbjct 47779 ACTCCAAGATCGACAAGGCCTCTGTCCACGAGATCGTCCTCGTCGGTGGGTCCACTCGTA 47838 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 | || ||| | || | | | || |||||||| || || ||||| | | Sbjct 47839 TCCCCAAGGTCCAGAAACTCGTCTCGGACTTCTTCAGCGGCAAGGAGCCTAACAAGTCCA 47898 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433 ||||||| ||||| || ||||| || ||||| || || |||||||| || ||| | |||| Sbjct 47899 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCTGTCCAGGCTGCCATCCTCACCGGTG 47958 Query 196434 TTGACAATA---ATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490 ||| | || ||| || | || | || ||||| || || | || | Sbjct 47959 ---ACACGTCCGAGAAGACCCAGGACTTGCTCTTGCTCGATGTGGCCCCGCTCTCGACCG 48015 Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550 || | || || || |||||||||||||| || | ||| | ||||| || | || | Sbjct 48016 GTATCGAGACCGCCGGTGGTGTTATGACCAAGCTCATTCCCCGCAACACGACCGTCCCTA 48075 Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610 | |||||| | ||| || || || |||| || ||||| |||||| || || | Sbjct 48076 CCAAGAAGTCCGAGACCTTCTCGACCTACGCCGACAACCAACCCGGTGTTTTGATCCAGG 48135 Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670 | || || || || || |||| ||||||| ||| | || || || | ||||| | Sbjct 48136 TCTACGAGGGTGAGCGTGCCCGCACAAAGGACAACAACCTCCTCGGCAAGTTCGAGCTTT 48195 Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 | || || || | || ||| | |||||||| ||| | | || |||||| || || | Sbjct 48196 CCGGCATCCCCCCCGCCCCCCGTGGTGTTCCGCAGGTCGAAGTCACCTTCGACATTGATG 48255 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 | || || ||||| |||||| | || | |||||| | | ||||| || | ||||| Sbjct 48256 CCAACGGTATTCTCAACGTCTCCGCCGCCGACAAGACAACCGGCAAGTCCAACAAGATCA 48315 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 || | || |||||||| || || |||||| || || || |||||||| | || | Sbjct 48316 CTATCTCGAACGACAAGGGTCGCCTCAGTAAGGACGAGATCGAGCGTATGGTGCGCGAAG 48375 Query 196851 CGGAAAAGTACAGGGAAGAAGACGA 196875 | || | || | | | ||||| || Sbjct 48376 CCGAGCAATATAAGCAGGAAGATGA 48400 >seq2638 Length=73519 Score = 206 bits (228), Expect = 3e-48 Identities = 183/229 (80%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171863 TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAG 171922 |||||||||| || || ||||| || || || || |||||||||||||| |||||||| | Sbjct 4067 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 4008 Query 171923 ACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGC 171982 |||| ||||| ||| |||| ||||||| || || ||||||||||| || ||||| |||| Sbjct 4007 ACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGC 3948 Query 171983 AACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACG 172042 |||| || || ||||| || || ||||| || ||||| || || ||||| ||||||||| Sbjct 3947 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACA 3888 Query 172043 TTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | ||||||||||| || || ||| | || || | || || |||||||| Sbjct 3887 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGC 3839 >seq2102 Length=107014 Score = 199 bits (220), Expect = 5e-46 Identities = 184/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || || || |||||||||||||| |||| Sbjct 67948 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 67889 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || |||| ||||||||||||| |||||||||||||| || | Sbjct 67888 CCTCGGACACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAG 67829 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| ||| | || || || || || ||||| || ||||| || || ||||| |||| Sbjct 67828 ACCAGCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 67769 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||| | || || | || || |||||| Sbjct 67768 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 67716 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || || || |||||||||||||| |||| Sbjct 68176 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 68117 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || |||| ||||||| ||||| ||||| || ||||| || | Sbjct 68116 CCTCGGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAG 68057 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| || || ||||| || || ||||| || ||||| || || ||||| |||| Sbjct 68056 ACCAACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 67997 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||| | || || | || || |||||| Sbjct 67996 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGTGGTGGT 67944 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||| | || || || || |||||||||||||| ||||| || Sbjct 68399 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 68340 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| ||||||| ||||| ||||| || ||||| || || || Sbjct 68339 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 68280 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || ||||| || || ||||| || ||||| || || ||||| ||||||||| Sbjct 68279 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 68220 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||||||| || || ||| | || || | || || |||||| Sbjct 68219 ATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGGT 68172 >seq2237 Length=56155 Score = 187 bits (206), Expect = 3e-42 Identities = 177/226 (78%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923 ||||||||| || || || ||||| || || || |||||||||||||| |||||||| || Sbjct 39748 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 39689 Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCA 171983 ||| ||||| ||| |||| ||||||| ||||| ||||||||||| || || || ||||| Sbjct 39688 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 39629 Query 171984 ACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGT 172043 ||| || || || || || || ||||| || ||||| || ||| | || || |||||| | Sbjct 39628 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 39569 Query 172044 TCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||||||||| || || ||| | || || | || || |||||| Sbjct 39568 CCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGAGGTGGT 39523 >seq2027 Length=89189 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | || || || || ||||| || ||||||||||| || Sbjct 8637 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 8696 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || |||||||| |||||||| |||||||| || || || Sbjct 8697 GACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAA 8756 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || || || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 8757 CAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAAC 8816 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | || || | || || |||||| Sbjct 8817 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGCCTCCGAGGTGGT 8864 Score = 185 bits (204), Expect = 1e-41 Identities = 171/217 (79%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||| | || || || || ||||| ||||||||||||| Sbjct 8860 GTGGTATGCAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGT 8919 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||||||| || ||||| |||||||| || | Sbjct 8920 CCTCGGACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAG 8979 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| || || || || || || ||||| || ||||| ||||| ||||| || | Sbjct 8980 ACCAACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACT 9039 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || |||||||| || || ||| | || || Sbjct 9040 ACAACATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 9076 >seq2336 Length=41453 Score = 111 bits (122), Expect = 2e-19 Identities = 240/355 (68%), Gaps = 3/355 (1%) Strand=Plus/Plus Query 195633 CCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGG 195692 |||| || || ||| | ||| | ||| |||||||||||||| || || | | | ||| Sbjct 35273 CCGAGGAGATCTCGGCCATGATCTTGGGCAAGATGAAGGAGACCGCCGAGGCCTACTTGG 35332 Query 195693 GTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGAC 195752 | || | || | | || || || || || || || ||||||| || | ||||||| Sbjct 35333 GCAAGAAGGTCACCCACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACGCTCAACGAC 35392 Query 195753 AGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAAC 195812 | ||||| |||||||| | | || || ||||| || ||| | | | || || | Sbjct 35393 AAGCGACCAAGGACGCCGGCACGATCGCCGGTCTCAATGTTCTCCGTGTCGTTAACGAGC 35452 Query 195813 CAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTAT 195872 | || || || || || || || ||||| ||||||| | | || || || || || Sbjct 35453 CCACCGCCGCCGCGATCGCCTACGGTCTCGACAAGACCGGTGGCG-AGCGCAACAT-CAT 35510 Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932 | ||| |||||||| || || ||||| |||||||| || ||| || || | ||| Sbjct 35511 CG-TCTACGATCTCGGGGGGGGAACGTTCGATGTCTCGCTCCTCTCGATCGAGGACGGTG 35569 Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || ||| ||| || || ||||| || || | |||||||| || || || Sbjct 35570 TCTTTGAGGTATTGGCCACCGCCGGTGACACCCACTTGGGTGGTGAGGACTTTGA 35624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657831768282000