Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3232 333 3e-86 seq2237 138 1e-27 seq2638 136 4e-27 seq2102 134 1e-26 seq2027 116 4e-21 seq3051 89.7 5e-13 >seq3232 Length=25038 Score = 333 bits (368), Expect = 3e-86 Identities = 840/1255 (67%), Gaps = 33/1255 (3%) Strand=Plus/Minus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| || ||| |||| Sbjct 4170 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT 4111 Query 148592 GAGCA-GCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 |||| |||| | |||| | ||| ||||||| || | || |||||||||| Sbjct 4110 GAGCTTGCGC----GCCTCGGGTGAATCGAACGGCATCGCCAACGCCATGAACGCGTCGG 4055 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 4054 CGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCG 3996 Query 148708 C-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGT 148765 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 3995 ATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGAC 3937 Query 148766 AATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGCG 148823 | | ||| | | ||| |||||| | | | |||| | |||| || ||| Sbjct 3936 GACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAACGCG 3879 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 || ||||| | ||||| ||||| |||||| || || |||||| | |||||||| | Sbjct 3878 ATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTG 3819 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 |||| || | |||||| ||| | ||||||||| || || |||| ||| Sbjct 3818 CACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCG 3759 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGA 149000 |||||||| |||||| |||| ||| ||||| ||||| | ||| | || | ||| | Sbjct 3758 TCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAA 3699 Query 149001 TGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATAC 149060 || | |||||| | | || || | ||| ||||||| |||||| || Sbjct 3698 AGC---TTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAAC 3642 Query 149061 A-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CACA 149118 | | ||| |||| | ||||| ||| |||| ||| |||||| ||| ||||| || | Sbjct 3641 AAGGCGCG-GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCAGCGGGGCAGA 3584 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 ||| | |||| ||| | | || | || |||| ||||||||||||||| | |||||||| Sbjct 3583 AGAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCG 3524 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238 | | | ||| || || || | || || ||| ||| ||| |||| || | Sbjct 3523 CAAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 3464 Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG- 149297 ||| | ||| |||||||| ||||| | ||| | ||||| || || |||||| Sbjct 3463 ACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGT 3404 Query 149298 --CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 || || |||||||||| |||| | ||||||| | || || | ||| || | |||| Sbjct 3403 TGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGC 3344 Query 149356 CACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 | | | ||| |||||| || | ||| | |||| ||| || | ||||| | | Sbjct 3343 CGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATG 3285 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTA 149473 | | ||||| || ||| || ||| |||||| |||||| ||| |||||| ||| Sbjct 3284 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTT-GAGCGTGTCGTA 3226 Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533 |||||| ||||| |||| ||||||||| | ||| || ||||| | | ||||| Sbjct 3225 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 3166 Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCAT 149593 | |||| ||||| ||| | || || |||||| ||||| || || | ||| | Sbjct 3165 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 3106 Query 149594 CTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCAT 149653 | |||||||| | ||||| || ||||| | || |||||||| | |||||||||||| Sbjct 3105 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 3046 Query 149654 CAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTC 149713 ||||| || ||||| || || || || ||| | || ||||||||| | || Sbjct 3045 GAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTC 2986 Query 149714 TAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || |||||| |||||||||| |||||| | || |||||| ||| | || |||| Sbjct 2985 GAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCG 2931 >seq2237 Length=56155 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 39545 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 39603 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 39604 CTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGAT 39663 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 39664 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 39723 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || ||||| || ||| || Sbjct 39724 CGTAAGAGTCTTGACGAAGATTTGCCTG 39751 >seq2638 Length=73519 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 3872 GTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 3930 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || ||||||||||| ||||||||||||||||| |||||| ||| Sbjct 3931 GGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTT 3990 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 3991 GACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 4050 Query 133643 TTTTACGAAAATCTGCA 133659 || ||||| || |||| Sbjct 4051 CTTGACGAAGATTTGCA 4067 >seq2102 Length=107014 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 68203 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 68261 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 68262 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 68321 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| ||| |||||||||| || Sbjct 68322 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGT 68381 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 68382 CTTGACGAAGATTTGCAT 68399 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 67747 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 67805 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 67806 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTT 67865 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 67866 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 67925 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 67926 CTTGACGAAGATTTGCAT 67943 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 67975 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 68033 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 68034 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 68093 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 68094 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 68153 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 68154 CTTGACGAAGATTTGCAT 68171 >seq2027 Length=89189 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||||||||||||||| Sbjct 9061 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 9003 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 9002 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTT 8943 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| |||| || Sbjct 8942 GACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGT 8883 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 8882 CTTGACGAAGATTTGCAT 8865 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | ||| | | | ||||||||||||||||| Sbjct 8833 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 8775 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| ||||| || ||||| ||| Sbjct 8774 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTT 8715 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | || ||| || || | |||| || |||||||| | || Sbjct 8714 TACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCGGTTAAGGT 8655 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 8654 CTTGACAAAGATTTGCAT 8637 >seq3051 Length=61137 Score = 89.7 bits (98), Expect = 5e-13 Identities = 180/259 (69%), Gaps = 15/259 (6%) Strand=Plus/Minus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAA--CGCCACCGGCAACGCCGACGTGAA 120551 ||| ||||||| || || |||||||| | ||| ||| | || | ||| || || Sbjct 32822 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAACCGCAA--GGAAGAGCCTCGGTCAA 32765 Query 120552 AAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCA 120610 || |||||||| || || || || ||||| | ||| ||| | | ||| | ||| Sbjct 32764 GAATTCCTTCTCGATCTCGACGGCTTCCTTAATGATGAGCGCG---ACGGTGTCGGGG-- 32710 Query 120611 TCTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCT 120667 | || |||| | || | | || || ||| |||| |||||||| ||||| ||||||| Sbjct 32709 TGAGGTCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGAAGGCCCT 32652 Query 120668 CGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGA 120727 |||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 32651 CGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGA 32592 Query 120728 TGTAGAATATGGCGGCAAA 120746 |||| |||| ||||| Sbjct 32591 GCCAGAAGATGGAAGCAAA 32573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483398290719000