Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2237 91.5 3e-13 seq2027 87.8 4e-12 seq2102 86.0 1e-11 >seq2237 Length=56155 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || |||||||| | || || || || ||||| |||| Sbjct 39736 CAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 39677 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| || || ||| ||| | || ||||| Sbjct 39676 CGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAACGTCTCATCTT 39617 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || |||||||| |||||| |||| || ||||| Sbjct 39616 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATCCAAAAGGAGTC 39557 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 39556 GACCCTCCAC 39547 >seq2027 Length=89189 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || |||||||| | || || || || ||| Sbjct 8640 CAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 8699 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| |||||||| || || || || ||| || ||| ||| Sbjct 8700 ACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAACAA 8759 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || ||||| | || | |||||||||||| || Sbjct 8760 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAACATC 8819 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 8820 CAGAAGGAGTCGACGCTGCAC 8840 >seq2102 Length=107014 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || || || |||||||| | || || || || ||||| |||| Sbjct 67929 CAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCGGACACGATCGACAA 67870 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| || ||| || || | ||||| Sbjct 67869 TGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAGCGATTGATCTT 67810 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| | || | || ||||||||| | ||||| ||||| Sbjct 67809 CGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATTCAGAAGGAGTC 67750 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 67749 GACGCTCCAC 67740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181764395755725