Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2237 136 4e-27 seq2102 131 2e-25 seq2638 125 7e-24 seq2027 114 1e-20 seq3232 89.7 5e-13 >seq2237 Length=56155 Score = 136 bits (150), Expect = 4e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| | ||| || || || |||||||| |||||||||||| | Sbjct 39524 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 39583 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || || | ||| ||||| || || || Sbjct 39584 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 39643 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || ||||| ||| | ||||||||||| || || Sbjct 39644 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 39703 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||||| || || || || || || | ||| || ||||| |||||| Sbjct 39704 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 39748 >seq2102 Length=107014 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 67717 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 67776 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || ||||| |||||||| || || || Sbjct 67777 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 67836 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || ||||| ||| | ||||| || || || || Sbjct 67837 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 67896 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| |||||||| Sbjct 67897 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 67943 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 68173 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 68232 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 68233 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 68292 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || || || || Sbjct 68293 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 68352 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| || || || ||||| |||||||| Sbjct 68353 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 68399 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 67945 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 68004 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 68005 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 68064 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || || || || Sbjct 68065 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 68124 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| |||||||| Sbjct 68125 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 68171 >seq2638 Length=73519 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| ||||| || |||||||| |||||||| || | | ||| | Sbjct 3851 AGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGG 3910 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| || | ||| ||||| ||||| || |||||||| Sbjct 3911 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCC 3970 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||||||||| || || ||||| || Sbjct 3971 TTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 4030 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || || || | || || ||||| ||||||| Sbjct 4031 ATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 4067 >seq2027 Length=89189 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || ||| |||| ||| || | ||| | ||| ||||| || ||||| || ||||||||||| Sbjct 9095 CTGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 9036 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | | || | || |||||||| ||||| || || || | ||| || || || || Sbjct 9035 GGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGG 8976 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || ||||| || || || ||||| || ||||| ||| | ||||| || || || Sbjct 8975 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 8916 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || || || || || ||||| |||||||| Sbjct 8915 AACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 8865 >seq3232 Length=25038 Score = 89.7 bits (98), Expect = 5e-13 Identities = 301/465 (65%), Gaps = 13/465 (3%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 ||||||| | ||| ||||| | ||| ||||| ||||||||||| ||||||| Sbjct 2994 CTACTTGCTTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAACACATGCTCATGCGCGT 3053 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || || ||||| ||||| | ||||| || || |||| | ||||| | | ||||| Sbjct 3054 CGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTC 3113 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GC 7699 | | ||||| ||||| ||||| || | || ||| || ||||| | Sbjct 3114 CGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACC 3169 Query 7700 CTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACA 7759 | || | || |||||||| || | |||||| || ||| ||||| ||||| ||| Sbjct 3170 CGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCATCTACG 3229 Query 7760 ACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTA 7818 ||||||| | || ||||| || ||||| || ||| || || ||| ||| | | Sbjct 3230 ACACGCT-CAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATC 3288 Query 7819 AACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTA 7878 || || | ||||| | ||| ||||| ||| ||||| | | | ||| | Sbjct 3289 CACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACTCGAACGGCATC 3348 Query 7879 GAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAG 7935 | |||||| | || || | ||| ||| | | ||| | || ||||| || || ||| Sbjct 3349 GTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAG 3408 Query 7936 CGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 || || ||| || ||||| | ||||| |||||||| ||| Sbjct 3409 CGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGAC 3453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505374867387000