Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3232 455 4e-123 seq3051 91.5 2e-13 seq1880 89.7 6e-13 >seq3232 Length=25038 Score = 455 bits (504), Expect = 4e-123 Identities = 781/1125 (69%), Gaps = 10/1125 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| || ||| ||| || | ||| Sbjct 3044 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 3103 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 3104 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 3163 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| |||||||| || | |||||||| ||| || || |||| Sbjct 3164 CTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCA 3223 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| ||||||||| |||||||| |||||||||| |||| |||||||| | Sbjct 3224 TCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 3283 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || |||||||| || ||| | Sbjct 3284 GCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGC-TACTCGAAC 3342 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || |||||||| |||||||| |||| ||||||||| || | |||||| |||| || ||| Sbjct 3343 GGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 3402 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| ||||||||||||||||||||||| |||||| | || Sbjct 3403 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGACGTCTTCGAG 3462 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | |||||| | ||| ||| || |||||| Sbjct 3463 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTCTTCTTT 3522 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | |||||||| || || || |||||| || ||| | | || |||| ||| Sbjct 3523 GCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGCCAGCGAGTGGCCCCTC 3582 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| ||| ||| ||||| | ||| ||||| ||||| | |||| | ||| Sbjct 3583 TTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCTTG 3642 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| ||||||| | ||| || | | | ||| Sbjct 3643 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 3702 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 || ||| | || || ||||||||| ||||||| |||| |||| |||||||||||| Sbjct 3703 TAC-GCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGC 3761 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||| ||| || || || || |||||| | ||| ||||||||||||| ||| |||| || Sbjct 3762 CGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAACTTGTGCAC 3821 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || ||| || ||| ||||| || || |||| || | Sbjct 3822 CGAGATCATCGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 3881 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| ||||| | | | ||||||| || ||| ||||||| | Sbjct 3882 GTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAGAAGTTGCACGAGGTCGTCAA 3941 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCG--ACCGAGGC 20070 ||||||| | || |||| ||| ||||||| |||| || |||| | ||| Sbjct 3942 GGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGA--- 3998 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 ||||| || || || | |||||||| || |||| ||||| || || || || ||||| Sbjct 3999 GGCGCAGAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGA 4058 Query 20131 CGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGG 20190 || |||||| | | | | | ||||| ||| |||||||| ||||||||||| Sbjct 4059 CGCGTTCATGGCGTTGGCGATGCCGTTCGATTCACCCGAGGCGCGCAAGCTCAACAAGCA 4118 Query 20191 CATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| || | |||||||| || || | |||||||| Sbjct 4119 GATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 4163 Score = 448 bits (496), Expect = 5e-121 Identities = 793/1147 (69%), Gaps = 13/1147 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 4154 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 4098 Query 78835 TTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCG 78894 | || ||||||| | | | | |||||| | ||||| || || || || ||| Sbjct 4097 TCGGGTGAATCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCG 4038 Query 78895 ATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAAG 78951 || |||| || |||||||| | |||| || | ||||||| | |||| || || Sbjct 4037 ATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGATAGTAG 3981 Query 78952 TTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTG 79011 || ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 3980 TTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC 3921 Query 79012 GCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCA 79070 || || | | | | ||| |||||| |||| | | ||| |||| |||||| Sbjct 3920 TTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGCA 3862 Query 79071 CACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT 79130 ||||| ||| || || || ||||||||| || |||||||| || |||||||| Sbjct 3861 GACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGACGACTT 3802 Query 79131 GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTA 79190 ||| ||||| | |||||| ||||| || | ||| ||||||||||||| |||| | Sbjct 3801 GATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAGAGCATGAA 3742 Query 79191 CGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGAC 79250 ||| | ||||| || ||||| | |||| ||| ||| | | | || ||| Sbjct 3741 CGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGGGGAT 3682 Query 79251 AACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCC 79310 ||||||| || |||| |||| || | |||| || ||| | || || Sbjct 3681 CGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCTTCGCC 3622 Query 79311 ATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTT 79370 |||||| ||| | ||||| ||| || ||||| | ||| |||| || | | Sbjct 3621 ATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCTGGCGGC 3562 Query 79371 CTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACG 79430 ||| || |||||| || || || || ||||| || || |||||| || || || Sbjct 3561 CTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCG 3502 Query 79431 CATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCA 79490 | |||||| | ||| |||||| || || || || || || | || ||| |||||||| Sbjct 3501 GACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCA 3442 Query 79491 CGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCG 79550 ||||| || ||||| ||||| | || |||||| ||| || |||| |||||| || Sbjct 3441 TGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCG 3382 Query 79551 GGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCC 79610 || ||||||||| | || ||||||||||| |||||||||| | | ||||||||| || Sbjct 3381 CGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCC 3322 Query 79611 GTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCA 79670 | ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 3321 GGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGT 3262 Query 79671 CTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTT 79730 |||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct 3261 CTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTT 3202 Query 79731 CATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGT 79790 ||| | ||||||||| || ||| | ||| |||| ||| |||||||||||||| || Sbjct 3201 CATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGT 3142 Query 79791 CGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGG 79850 ||||| ||||| || ||| | | | ||| || | ||||| || | ||||||| Sbjct 3141 CGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTC 3082 Query 79851 GAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCGC 79909 || ||||| |||||||||||||| ||||||||||||| | || || |||||| ||| Sbjct 3081 GATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGGCGT-TCGG 3023 Query 79910 CGACATT 79916 |||| || Sbjct 3022 CGACCTT 3016 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||||||||| || || |||||| ||||| | ||| Sbjct 4974 GGCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 4915 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 4914 CATCGACGTGAGCTGTGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 4855 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | || || || ||||||| || ||||| | | |||||||| | |||||| Sbjct 4854 GTCGATGAAGGCGCCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 4795 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 4794 GACGGTCTTGTAGATGGCCTTGAGATC 4768 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || || Sbjct 4771 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 4830 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| ||||||| |||||||||||| || |||||||| || | || || ||| Sbjct 4831 GCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 4890 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | |||| |||| | || ||||| | ||||||||| | || || ||||||||| Sbjct 4891 ACGATGGCACAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGC 4950 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 4951 ATGTACTACTTGCGCACGCGCGCC 4974 >seq3051 Length=61137 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 |||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 32567 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 32626 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| ||||| || ||||||||||| || Sbjct 32627 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTTCA 32661 >seq1880 Length=81946 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||||| ||| | || || ||||||||||| || ||||||||||| ||||| || Sbjct 66021 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGT 65962 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 |||||||||||||| || ||||| ||||| || || ||| Sbjct 65961 TTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 65923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548499259314000