Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2102 111 1e-19 seq2638 96.9 2e-15 seq2027 87.8 1e-12 >seq2102 Length=107014 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || ||||| || |||||||| ||||| || || ||| || Sbjct 68171 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 68112 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || || || | | ||||| || ||| | || ||||| || Sbjct 68111 GACACGATTGACAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 68053 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| ||||| || || || || | ||||| | | |||||||| Sbjct 68052 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 67993 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 67992 CATTCAGAAGGAGTCGAC 67975 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || ||||| || |||||||| ||||| || || ||| || Sbjct 67943 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 67884 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || | || ||||| ||||| | || ||||| || Sbjct 67883 GACACGATCGACAATGTCAAGACCAAGA-TTCAAGACAAGGAAGGCATTCCCCCAGACCA 67825 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || || ||||| || || || || | ||||| | | |||||||| Sbjct 67824 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 67765 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 67764 CATTCAGAAGGAGTCGAC 67747 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||| | || || || || ||||| ||||| || || ||| || Sbjct 68399 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 68340 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || || || | | ||||| || ||| | || ||||| || Sbjct 68339 GACACGATTGACAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 68281 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| ||||| || || || || | ||||| | | |||||||| Sbjct 68280 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 68221 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 68220 CATTCAGAAGGAGTCGAC 68203 >seq2638 Length=73519 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 |||| || ||||| || ||||||||||| || || ||||| ||||| || || || | | Sbjct 4067 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 4008 Query 23672 ACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | || || | || || || | | ||||| ||||| | || || || || Sbjct 4007 ACACGATCGACAACGTCAAGACCAAGA-TCCAGGACAAGGAAGGCATCCCCCCCGACCAG 3949 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||||||||| || || || || | ||||| | | ||||||||| Sbjct 3948 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 3889 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 3888 ATCCAAAAGGAGTCGAC 3872 >seq2027 Length=89189 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23605 CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 ||| | ||||| || || || || ||| | || || || |||||||| || || ||||| Sbjct 8631 CTTCAGATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAG 8690 Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 ||| ||||||| | || | |||| || ||| || || || || | || ||| Sbjct 8691 TCCTCGGACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCA 8750 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 || ||||| ||| | || || || ||||| || || || || | || || | | |||| Sbjct 8751 GACCAACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGAT 8810 Query 23785 TACAACATACAAAAAGAGTCCAC 23807 |||||||| || || ||||| || Sbjct 8811 TACAACATCCAGAAGGAGTCGAC 8833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337994254892300