Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1957 158 9e-34 >seq1957 Length=81828 Score = 158 bits (174), Expect = 9e-34 Identities = 242/342 (71%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| || | || |||||| | ||| || ||||| | | |||| | || Sbjct 77088 GGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAC 77029 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TA 27500 || | || |||||| |||||| |||| || || | ||| || |||| || Sbjct 77028 AGCCTGCATCAACTGATCGACCCCCTCCCCCTGATAATC-ATCCT--TGGCCGTCCTATA 76972 Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560 |||||| ||||| |||||||| |||||||| || |||||||||| || ||||||||||| Sbjct 76971 CTCTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCT 76912 Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620 ||| | || || |||||||| ||| ||||| || || || | ||||| ||||| || Sbjct 76911 ATGCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGAC 76852 Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 |||||| ||||| | ||| || | || || |||| |||||||| || || ||||| Sbjct 76851 CCCCTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTC 76792 Query 27681 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || | | ||||||| ||||||| || | ||||| Sbjct 76791 GATGATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 76750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369490424950475