Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq595 102 6e-17 >seq595 Length=11440 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| || | || ||||||||||| || || | || | || | | Sbjct 8587 TTCCAAGCACTCAAAATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGACAACT 8646 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA--GACCTTGATATTCTG 97408 ||| | || ||||| || |||| || ||||| | ||| | ||| ||| |||| Sbjct 8647 TGCATCAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCCT--ATACTCTG 8704 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | || ||||||||||| ||||| |||||||| ||||| || || || ||||| |||| || Sbjct 8705 CGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGAC 8764 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || |||| |||||| | | | || |||||||| |||||||||| Sbjct 8765 CCAACCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAAT 8813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346705984328630