Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq846 150 4e-31 >seq846 Length=7932 Score = 150 bits (166), Expect = 4e-31 Identities = 465/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Minus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| | ||||| | ||||| | Sbjct 5901 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTCATCTACGACCGCGATTTCGGC 5842 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| || || || | || || || |||||| Sbjct 5841 TACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGCTTCGCATCGACGGCAAG 5782 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| || |||||| | ||||| || || ||||| || ||| | ||| Sbjct 5781 GTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 5722 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 5721 ATTGAGCGCGTCTTGCAGTCGTACAACCTTATGTCCGAGCGCTACTTTACCCACGCCTCG 5662 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| || || || || | | Sbjct 5661 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 5603 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | || || || | || |||||||| |||||||||| ||||| ||| || Sbjct 5602 GATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTTA---AGACGTGCGCGCTCAT 5546 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| || || |||||| | | || ||||||||| |||| || || || Sbjct 5545 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTA 5486 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || ||||| || | | || || || ||| | || || || | Sbjct 5485 CATCGCCGGCACAAACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAA 5426 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 |||||| | | | || |||| | || | || || | ||||| || || | Sbjct 5425 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 5366 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || |||||||||||| | || || ||||||||| | |||||| ||||||| || Sbjct 5365 CGAGCCGTGGCACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGA 5306 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | |||| | |||||| || Sbjct 5305 GGAAGTTCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCG 5246 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||||||| | || | | || |||| ||||| | |||| Sbjct 5245 TGTCGAGGCCGCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 5191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073512447870912