Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq289 185 1e-42 seq1727 174 2e-39 seq1935 154 2e-33 >seq289 Length=20070 Score = 185 bits (204), Expect = 1e-42 Identities = 161/200 (81%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| |||||||||||||| Sbjct 15714 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGTCGTGGTGGT 15773 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || ||| |||| ||||||| ||| | ||| | |||||||||||| Sbjct 15774 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACTCGAGGCGTTCTCAAGATCTTCCTC 15833 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 15834 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 15893 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 15894 TCGCTCGATGTCGTCTACGC 15913 >seq1727 Length=1927 Score = 174 bits (192), Expect = 2e-39 Identities = 180/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| || ||||||||||| Sbjct 607 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCACGTCGTGGTGGT 548 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 547 GTGAAGCGTATCTCCGGCCTGATCTACGAAGAGACCCGAGGTGTGCTCAAGATCTTCCTC 488 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||| | | ||| ||||||||||| || || ||||| |||||| Sbjct 487 GAGAACGTGATCCGTGATTCGGTGACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 428 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || |||| || ||||| | | | || ||||| || Sbjct 427 TCGCTCGATGTCGTCTACGCCCTGAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 372 >seq1935 Length=1570 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || |||||||| || || ||||| ||||| || ||||||||||| Sbjct 1326 CGCGATAACATCCAGGGTATCACCAAACCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 1385 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | || ||||||||| Sbjct 1386 GTCAAGCGTATCTCCGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAAATCTTCCTC 1445 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 1446 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 1505 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 1506 TCGCTCGATGTCGTCTACGC 1525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79058322807087