Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq337 109 4e-19 >seq337 Length=18092 Score = 109 bits (120), Expect = 4e-19 Identities = 274/406 (67%), Gaps = 9/406 (2%) Strand=Plus/Plus Query 6200 GTTCTACCGCTACAAAATG-CCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||||||||||||| ||| || ||| ||| ||||| ||||||| || ||||| | Sbjct 10393 GTTCTACCGCTACAAGATGCCCTCGC-TCTTGACCAAGATCGAGGGCCGCGGCAACGGCA 10451 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGA-CGCCCTGCCACC 6317 | || || || || ||||||| |||| ||||| || || | | ||||| | | Sbjct 10452 TCAAGACTGTGTTTCCCAACATGGCTGATGTCGCGCGAGC-CTTGAATCGCCCGTCGTCG 10510 Query 6318 TACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAAC 6377 |||||||| || | || ||||||||||| ||||| ||| || || | | | | | Sbjct 10511 TACCCGACCAAGTTCTTTGGGTGCGAACTCGGCGCCCAGGCGACCTTCAACGATGAGACC 10570 Query 6378 GAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGC 6437 || |||| |||||| || || |||| | | |||| ||||| || |||| | Sbjct 10571 GAACGCTACATCGTCAATGGCGCGCACGAGACGAATCGTCTGCGTGACTTGCTCGACGTC 10630 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497 || || |||||| |||||||| | ||| | ||||| || || ||||| || Sbjct 10631 TTCATCGACAAGTTCGTGCTGTGCGCGTCGTGCAAGAACCCCGAAACGGAGCTCAT--CA 10688 Query 6498 TCTACCAAGAGAAACACCATCTCTCAG-GGCTGCAAAGCGTGCGGTTACCATGGCAAGCT 6556 || | |||| || |||| ||| | | |||||| || ||||| | | ||||| | Sbjct 10689 TCACCAAAGACGAA-TTCATC-CTCCGTGACTGCAAGGCCTGCGGCAAGCGCGGCAACGT 10746 Query 6557 GGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCCA 6602 || | |||||||||| |||||||| || ||||| || ||| Sbjct 10747 CGACATGCGCCACAAACTCACGACCTTCATCCTTAAGAACCCCCCA 10792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334871847242429