Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq846 100 5e-16 >seq846 Length=7932 Score = 100 bits (110), Expect = 5e-16 Identities = 165/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894 |||||| || || ||||||| || || ||||| |||| || | | || ||||||| Sbjct 3801 GTCTTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCCCGCGTGCGCAAGTAGTACA 3859 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACG 203953 |||| ||||| || || ||| ||| ||||| | |||||| || | || | || || Sbjct 3860 TGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCG 3919 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 ||||| || | || ||| ||||| || || || ||||| ||| ||||| || || || Sbjct 3920 TTGGGCTC-GACAAGTGGATGTTAAGCGATTGCGACTGGTCAATG-AAGGCACCTCGGTC 3977 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | |||||| ||||| ||||| | |||||| || |||||| Sbjct 3978 GGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 4026 Score = 87.8 bits (96), Expect = 3e-12 Identities = 339/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Plus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | | || |||||||| || | || | | || Sbjct 5248 CTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTTCCTC 5307 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | |||||||||||||||||| | Sbjct 5308 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AATTCGAAGACGTCGGCGTGCCACGGCTCGA 5366 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 5367 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 5426 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | ||||| |||| | |||| Sbjct 5427 TGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTTGTGCCGGCGATGT 5486 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 5487 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 5546 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| |||| || ||| ||| |||||| | || ||||| ||| || || Sbjct 5547 TGAGCGCGCACGTCTT-AAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTG 5605 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| ||||||||| || Sbjct 5606 ACCAGGAAACAGGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 5664 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| | ||| |||| || | |||| | || || |||| ||| | || Sbjct 5665 GGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTC 5724 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | ||||| || || | ||||| | ||||| | |||||| || Sbjct 5725 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGG 5769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794971727877040