Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq15 367 2e-96 seq45 138 1e-27 seq1188 136 5e-27 seq18313 132 6e-26 seq393 122 1e-22 seq16180 120 4e-22 seq891 120 4e-22 seq776 114 2e-20 seq18 96.9 5e-15 >seq15 Length=59861 Score = 367 bits (406), Expect = 2e-96 Identities = 845/1269 (67%), Gaps = 8/1269 (1%) Strand=Plus/Minus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 || |||| || || || | ||||| ||||| || || ||| | || | ||||||||| Sbjct 24219 GGCGAGACCAAGCAGTTCACCCCCGAGGAAATCTCATCCATGATCCTGCTGAAGATGAAG 24160 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 ||||| || || | | | | || | || || | || || || ||||| || || Sbjct 24159 GAGACCGCTGAGGCCTACCTCGGCACGACCGTCTCCAACGCCGTCGTCACTGTCCCCGCC 24100 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || || || ||||| || || ||||| || | || || |||| || ||| Sbjct 24099 TACTTCAACGACTCGCAGCGACAAGCCACCAAGGATGCCGGTGTCATCTCGGGCCTCAAC 24040 Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 || | ||||| || || || || || || || || ||||| || || |||||||| Sbjct 24039 GTCCTCCGTATTATTAACGAGCCCACCGCCGCCGCCATCGCTTACGGCCTCGACAAGAAG 23980 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 | | || || || || || | |||||||||||||| || || ||||| |||||||| Sbjct 23979 ACCGTCGGCGAGAAGAACGTCCTCATCTTTGATCTCGGAGGAGGAACGTTCGATGTCTCC 23920 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 ||| | | ||||| | ||||| ||||| || ||||| || || ||||| || || | Sbjct 23919 CTTTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCCGGTGACACCCACTTG 23860 Query 195971 GGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAA 196029 || ||||| || ||||| || || || ||| || ||| | |||||| || || Sbjct 23859 GGAGGTGAGGACTTCGACAACCGACTCGTCACTCACTTCGTC-GCCGAGTTCAAGCGCAA 23801 Query 196030 GAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089 ||| ||||| ||| | || || | | ||||| ||||| || | ||||| || || Sbjct 23800 GAACAAGAAGGATCTCTCGTCCAACGCCCGTGCTCTCCGTCGTCTCCGCACTGCCTGCGA 23741 Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149 |||||||| ||||| |||||||| | || || || | | ||||| || ||| | || Sbjct 23740 GCGTGCCAAGCGAACCCTCTCTTCGGCCGCGCAGACTACCATCGAGATCGACTCGCTCTT 23681 Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGA 196209 || || || |||||||| || | || || ||||| || || || ||||| | || Sbjct 23680 CGAGGGTATCGACTTCTACACCTCCATCACTCGTGCTCGCTTCGAGGAGTTGTGCCAAGA 23621 Query 196210 TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAA 196269 ||||| | |||||||| || || | || ||||| ||| | ||||| || || Sbjct 23620 CTTGTTCCGTGGCACCATGGAACCCGTCGAGAAGGTCCTTCGCGACTCCAAGATCGACAA 23561 Query 196270 GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA 196329 | || || | || || ||||| || || || || || |||||||||||| | || | Sbjct 23560 GGCTTCCGTCCACGAGATCGTCCTCGTTGGTGGCTCCACTCGTATTCCGAAGGTCCAGAA 23501 Query 196330 GATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGC 196389 | | || || |||||| || || ||||| | |||||||| ||||| || Sbjct 23500 ACTCGTCTCGGACTACTTCAACGGCAAGGAGCCTAACAAGTCCATCAACCCCGATGAGGC 23441 Query 196390 AGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACA---ATAATAA 196446 ||||| || ||||| || || ||||| || || ||| | || ||||| | || Sbjct 23440 CGTTGCCTACGGTGCCGCTGTCCAGGCCGCCATCCTCACCGG---TGACACGTCCGAGAA 23384 Query 196447 CGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGG 196506 ||| || | || | || ||||| || || | || ||| | || || || || Sbjct 23383 GACCCAGGACTTGCTCTTGCTCGATGTCGCCCCGCTCTCGACCGGTATCGAGACCGCCGG 23324 Query 196507 TGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGT 196566 |||||| ||||| || | || | ||||| || | || ||||||||| | Sbjct 23323 TGGTGTCATGACGAAGCTCATCCCCCGCAACACGACCGTCCCCACTAAGAAGTCCGAGAC 23264 Query 196567 CTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACG 196626 ||| || || || |||| || || || ||||| || || || || || || || || Sbjct 23263 CTTCTCGACCTACGCCGACAACCAGCCCGGTGTCTTGATCCAGGTCTACGAGGGTGAGCG 23204 Query 196627 CTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGC 196686 |||| | ||||| ||| | || || || | ||||| | | || || || | || Sbjct 23203 TGCCCGCACGAAGGACAACAACCTCCTCGGCAAGTTCGAGCTCTCTGGCATCCCCCCCGC 23144 Query 196687 ACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAA 196746 ||| | |||||||| ||| | | || |||||| || || || || || ||||| || Sbjct 23143 CCCCCGTGGTGTTCCGCAGGTCGAAGTCACCTTCGACATTGATGCCAACGGTATTCTCAA 23084 Query 196747 CGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAA 196806 |||| | || | |||||| | | ||||| || | ||||| || | || ||||| Sbjct 23083 CGTCTCCGCCGCCGACAAGACGACCGGCAAGTCCAACAAGATCACTATCTCGAACGACAA 23024 Query 196807 GGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGA 196866 ||| || || |||||| || || || |||||||| | || || || | |||| | | Sbjct 23023 GGGTCGCCTCAGTAAGGACGAGATCGAGCGTATGGTGCGCGAAGCCGAGCAATACAAGCA 22964 Query 196867 AGAAGACGA 196875 ||||| || Sbjct 22963 GGAAGATGA 22955 >seq45 Length=44890 Score = 138 bits (152), Expect = 1e-27 Identities = 246/355 (69%), Gaps = 3/355 (1%) Strand=Plus/Minus Query 195633 CCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGG 195692 |||| || || ||| | ||| | ||| |||||||||||||| || || | | | ||| Sbjct 6898 CCGAGGAGATCTCGGCCATGATTTTGGGCAAGATGAAGGAGACCGCCGAGGCCTACTTGG 6839 Query 195693 GTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGAC 195752 | || | || | | || || || || || || || ||||||| || | ||||||| Sbjct 6838 GCAAGAAGGTCACCCACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACGCTCAACGAC 6779 Query 195753 AGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAAC 195812 | ||||| |||||||||| | || || ||||| ||| ||| || || |||| || | Sbjct 6778 AAGCGACCAAGGACGCTGGCACGATCGCCGGTCTGAACGTTCTCCGAGTTGTCAACGAGC 6719 Query 195813 CAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTAT 195872 | || || || || || || || ||||| ||||||| | | || || || || || Sbjct 6718 CCACTGCCGCCGCGATCGCCTACGGTCTCGACAAGACCGGTGGCG-AGCGCAACAT-CAT 6661 Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932 | ||| |||||||| || || ||||| |||||||| || ||| || |||| ||| Sbjct 6660 CG-TCTACGATCTCGGAGGAGGAACGTTCGATGTCTCGCTCCTCTCGATCGAAGACGGTG 6602 Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || || ||| || || ||||| || || | |||||||| || ||||| Sbjct 6601 TCTTTGAGGTCTTGGCCACCGCCGGTGACACCCACTTGGGTGGTGAGGACTTCGA 6547 >seq1188 Length=4438 Score = 136 bits (150), Expect = 5e-27 Identities = 131/168 (78%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||||| || |||||||||||||| || || ||| Sbjct 3 GACACGATCGACAACGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 62 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 63 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCGGATTACAAC 122 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | || || | || || |||||| Sbjct 123 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 170 >seq18313 Length=201 Score = 132 bits (146), Expect = 6e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||||| || |||||||||||||| || || ||| Sbjct 3 GACACGATCGACAACGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 62 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || ||||| || ||||| || ||||| || || ||||| |||||||| Sbjct 63 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 122 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | || || | || || |||||| Sbjct 123 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 170 >seq393 Length=16264 Score = 122 bits (134), Expect = 1e-22 Identities = 94/112 (84%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 171863 TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAG 171922 ||||||||||||| || ||||| || || || || |||||||||||||| |||||||| | Sbjct 114 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 55 Query 171923 ACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974 |||| ||||| ||| |||| ||||||| ||||| ||||||||||| || || Sbjct 54 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCC 3 >seq16180 Length=216 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| ||||| || || || || |||||||| |||| Sbjct 123 GTGGTATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATTACGCTCGAGGTCGAGT 64 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| |||||||| ||||| ||||| |||||||| || | Sbjct 63 CCTCGGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAG 4 Query 171977 A 171977 | Sbjct 3 A 3 >seq891 Length=7314 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923 |||||||||||| || || ||||| || || || |||||||||||||| |||||||| || Sbjct 7202 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 7261 Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974 ||| ||||| ||| |||| ||||||| ||||| ||||||||||| || || Sbjct 7262 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCC 7312 >seq776 Length=8776 Score = 114 bits (126), Expect = 2e-20 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||||| || || || || ||||| |||||||| ||||| || Sbjct 8659 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 8718 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGA 171977 ||||| ||||| ||| |||| |||||||| ||||| ||||| |||||||| || || Sbjct 8719 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGA 8774 >seq18 Length=58747 Score = 96.9 bits (106), Expect = 5e-15 Identities = 275/412 (67%), Gaps = 13/412 (3%) Strand=Plus/Minus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 ||||| || |||| || || ||| || ||||| ||| || |||| |||| | || Sbjct 54397 TTCAACGACGTTGCCGGCATGGACGAGGCCAAGGAAGAGATCATGGAGTTTGTCAAGTTC 54338 Query 198510 CTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCTC 198569 || || | |||| ||||||| | | |||||| ||||| || ||||| | || Sbjct 54337 CTCAAGGAGCCCGCAAAGTACGAACGGCTCGGTGCCAAGATCCCTCGCGGTGCGATGCTT 54278 Query 198570 GCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGT 198629 | ||| | ||||| || ||||||||| | || || || | ||| ||||| | | Sbjct 54277 TCTGGTCCTCCGGGAACGGGTAAAACCTTGCTCGCCAAGGCGACCGCCGGTGAGGCCGGC 54218 Query 198630 GTCCCCTTTCT-TCAGTGCTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTGGTG 198687 || |||||| | || || ||| | | |||||| ||||||||||||| ||||| ||| Sbjct 54217 GTGCCCTTTTTGTCTGT-CTCGGGATCCGAGTTTG-TCGAGATGTTCGTCGGTGTCGGTC 54160 Query 198688 CTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAA-CCATGTATCATCTTC 198746 | || || || || | |||| | || | ||| | | || || ||||||||| Sbjct 54159 CCTCTCGAGTGCGCGACTTGTTTGCGACCGC-CAAGAAGAACGCGCCGTGCATCATCTTC 54101 Query 198747 ATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTAC-TACA----CCTGGTA 198801 || || || || ||||| | || |||| |||| | || | ||| ||| | Sbjct 54100 ATCGACGAAATCGACGCCATCGGCAAGAGTCGTG--GCAAGGGCGGACAGTTTGGTGGCA 54043 Query 198802 ATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTT 198853 | || ||||| ||| ||| | |||||||| ||| |||||||||||||| Sbjct 54042 ACGACGAGCGCGAGTCGACATTGAACCAGCTGCTCGTCGAGATGGATGGTTT 53991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657710606474480