Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq846 89.7 5e-13 >seq846 Length=7932 Score = 89.7 bits (98), Expect = 5e-13 Identities = 330/516 (64%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| ||||||| || ||| || |||| | | ||||| | || | ||||||| Sbjct 5858 ACGACCGCGATTTCGGCTACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGC 5799 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 | ||| ||||| | ||| ||||| ||||||||||| |||| || || || | Sbjct 5798 TTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCG 5739 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651 |||| ||||| | |||||||| || |||| | ||||| | | ||||| | Sbjct 5738 GCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCGTACAACCTTATGTCCGAGCGCT 5679 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GCCTCAATTG 7707 | ||||| ||||| ||||| || | || ||| || ||||| || || | Sbjct 5678 ACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACCCGCAGCTT 5623 Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767 || || ||||| || | || ||| || || || || ||||||||| ||||||| Sbjct 5622 TCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTT 5563 Query 7768 CGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTG 7827 ||||| || ||||| || ||| || || ||| ||| | | || || | Sbjct 5562 AAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATC 5503 Query 7828 CGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 ||||| | ||| | ||||| ||| ||||| | | | ||| | | |||||| Sbjct 5502 CGCGCGACCGGCTCCTACATCGCCGGCACAAACGGCTACTCGAACGGCATTGTCCCCATG 5443 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGC 7944 | || || | ||| ||| | | ||| | || ||||| || || ||||| || Sbjct 5442 CTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGA 5383 Query 7945 GCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||| || ||||| | |||||||||||||| ||| Sbjct 5382 GCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGAC 5347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505281785636680