Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13902 84.2 2e-11 seq18313 82.4 7e-11 seq1188 82.4 7e-11 >seq13902 Length=235 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || |||||| | || || || || || || | || ||| |||| || | ||||| Sbjct 1 ACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTCAAGACC 60 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || || || || ||||| || || || ||||| ||| | || | ||| ||||| Sbjct 61 AAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAACAACGTCTCATCTTCGCTGGCAAG 120 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || || | || | ||||||||||||| || ||||||||||| | || Sbjct 121 CAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATCCAGAAGGAGTCGACGCTCCAC 180 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| | || ||||| || Sbjct 181 TTGGTGCTGCGTCTCCGTGGTGGTAT 206 >seq18313 Length=201 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| |||||||| || || || || Sbjct 3 GACACGATCGACAACGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 62 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | || || | || | |||||||||| Sbjct 63 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 122 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| ||||| | || ||||| || Sbjct 123 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGTAT 172 >seq1188 Length=4438 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/170 (71%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| |||||||| || || || || Sbjct 3 GACACGATCGACAACGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 62 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTAC 27164 ||||| || || | ||| ||||| || | || || | || || || | |||||| Sbjct 63 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCG---CGGATTAC 119 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||||||||| | || ||||| ||||| | || ||||| Sbjct 120 AACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGG 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434818048015680