Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016715.1_202016-07-08] 4,467 sequences; 26,210,450 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1663 165 1e-35 seq1973 122 1e-22 seq1794 89.7 6e-13 >seq1663 Length=15306 Score = 165 bits (182), Expect = 1e-35 Identities = 557/859 (65%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 12290 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 12349 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||| || || ||| || ||||| | |||||||| || || || |||| Sbjct 12350 GTGCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCG 12409 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || || ||||| ||||| | || | || || || |||| | ||||| || | | Sbjct 12410 GCGTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 12469 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 12470 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 12528 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| ||||| || || | | || ||| || || || | | |||||||| Sbjct 12529 CAAGGCGCGGAACTCCTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 12588 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||||| ||| | || | |||| ||||||| |||||| || || || |||||||| || Sbjct 12589 GAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGC 12648 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| |||| |||| || | || || || || | |||| || Sbjct 12649 AAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 12708 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 12709 TTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 12768 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | || || Sbjct 12769 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCC 12828 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| ||||| || ||| || ||| | | || | || | |||||| Sbjct 12829 GTTCGAGTAGCCGTTTGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 12886 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | | || || |||| Sbjct 12887 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAA 12946 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || || ||||| ||| |||| | | || ||||| ||| ||| | || || Sbjct 12947 ATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGA 13006 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 13007 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGG 13066 Query 115244 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303 | ||| | || ||||||| |||||| | ||||| || |||| | ||| ||||| Sbjct 13067 TTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATG 13126 Query 115304 AACATGTATTG-GGGTGTT 115321 | ||||| ||| ||| ||| Sbjct 13127 AGCATGTGTTGCGGGCGTT 13145 >seq1973 Length=46233 Score = 122 bits (134), Expect = 1e-22 Identities = 291/432 (67%), Gaps = 15/432 (3%) Strand=Plus/Plus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCATTGAGACCACAAACCCC---AACTTGAGG 172582 ||||||| ||||||| ||| || || | | || || || ||| | |||||| Sbjct 12234 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAGCAAGAAGCCCTTTAGCTTGAGC 12293 Query 172583 AGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCG 172642 | || || | |||| | || | || | ||| |||||||||||||| || |||||| Sbjct 12294 AACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCATCG 12353 Query 172643 TTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAC 172702 | ||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 12354 TGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAA 12413 Query 172703 TCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT- 172761 | || ||||| || ||||||||||||| ||||| | ||||| ||| || | ||| Sbjct 12414 ACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGTC 12469 Query 172762 GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACAC 172818 ||| | || | | || || || || || |||| || || | |||||| || Sbjct 12470 GAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAAAC 12529 Query 172819 ACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATC 172878 ||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||| Sbjct 12530 ACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAATC 12589 Query 172879 ACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGCA 172936 || || |||| ||||||||| ||||| || | | | ||| || || ||||||||| Sbjct 12590 TCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGCA 12647 Query 172937 TCGTCCAACTTG 172948 || || | |||| Sbjct 12648 TCTTCGAGCTTG 12659 >seq1794 Length=42031 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || || || || |||||||| ||| || || ||| || ||||||| ||| | Sbjct 5491 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTTGTCGAGACCCCTCAGTCCGAGACG 5550 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 5551 ACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 5610 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || | | | |||||| |||||| ||||||||||||||| Sbjct 5611 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 5670 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || ||||| ||||||| ||||| || | |||||| Sbjct 5671 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597320245268360