Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq196 201 2e-46 seq177 188 1e-42 seq147 178 2e-39 seq63 170 4e-37 seq39 163 5e-35 seq46 161 2e-34 seq2 113 8e-20 seq178 102 2e-16 seq154 87.8 3e-12 >seq196 Length=36967 Score = 201 bits (222), Expect = 2e-46 Identities = 299/419 (71%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| | ||| ||||||| | ||||| ||||| || || |||||||| ||||| || Sbjct 25794 CTGCATCATCCTCCACATACCCTCGACGTAGTCGGCGGCGTGTCCCCAATCACGCTTGGC 25853 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364 ||||| || |||||| | ||||| | ||| | |||||| | | || || | | | | Sbjct 25854 CTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 25912 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 | | || || | || || || || ||||| | ||| |||||||||||| | || Sbjct 25913 GGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 25972 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 | |||||||||||| ||||||| || ||||| ||||||||| ||| ||||||| || Sbjct 25973 TACCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACGATCCAGTAGGCGT 26032 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544 ||| ||| || ||| |||| || ||||| || | |||||||||||| ||||||| Sbjct 26033 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGG 26092 Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603 | || ||| ||||| | | |||||| ||||| ||||||||||| | || || Sbjct 26093 TCTCGACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTAGAAGCGGACGTGCTTGG 26152 Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 || || || ||| ||||||| || ||||| | ||| || ||||| | || || ||||| Sbjct 26153 TCAAG-CCACAGGTTCGGATCGCGTCGAGGAGACGCAGTGTTCCAAGACCGTCGACGTC 26210 >seq177 Length=41378 Score = 188 bits (208), Expect = 1e-42 Identities = 283/397 (71%), Gaps = 4/397 (1%) Strand=Plus/Plus Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327 || || || || || || || |||||||| ||||| || |||||||| |||||| | ||| Sbjct 35225 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCATGTTACCGAGGTAAAGG 35284 Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 || | ||| | |||||| | | || || | |||| | ||| |||| || ||||| Sbjct 35285 CAATCCTGTTGACCGAGCGAGATCTCG-GCGACGGCGCGTGAGATCTTTCTCGTGACGAA 35343 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446 || |||||| | ||| |||||||||||||||||| |||||||||||| ||||| | Sbjct 35344 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCGTTGCACGCGTACATGTC 35403 Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506 || | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| || Sbjct 35404 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTCCGTAGGG 35463 Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566 ||||| || | |||||| ||||| |||||| | || || ||||| | | Sbjct 35464 CGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACAACCTTGCCGTACAA 35523 Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625 ||| |||||||| || |||||||| | || || || || ||||| | ||||| | Sbjct 35524 CTCCGAGGTCGAGGCCTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 35582 Query 268626 CCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 | ||||| | ||| || ||||||| || || || || Sbjct 35583 CGTCGAGGAGACGGAGTGTTCCCAGACCGTCAACATC 35619 >seq147 Length=48581 Score = 178 bits (196), Expect = 2e-39 Identities = 175/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 44739 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 44680 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 44679 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 44620 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 44619 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 44560 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || ||||||||||||||||| || || |||| Sbjct 44559 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 44514 >seq63 Length=84378 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || |||||||| ||||| | | Sbjct 76643 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 76702 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 76703 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 76762 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| | ||||||| ||||| ||||| | || || || Sbjct 76763 ATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACC 76822 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || |||||||| || |||||||| Sbjct 76823 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 76869 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || ||||| || ||||||| | Sbjct 77099 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 77158 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 77159 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 77218 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 77219 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 77278 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || |||||||| || |||||||| Sbjct 77279 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 77325 >seq39 Length=108268 Score = 163 bits (180), Expect = 5e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 52864 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 52923 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 52924 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 52983 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 52984 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 53043 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | |||||| || || ||||| || |||||||| || || ||| Sbjct 53044 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 53088 >seq46 Length=101831 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| ||||| ||||| || ||||| || ||||||| | Sbjct 123 CCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 182 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | || || ||||| || ||| Sbjct 183 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 242 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||||||| ||||| ||||| | || || || Sbjct 243 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 302 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| || ||||| Sbjct 303 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 349 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 68343 TGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCT 68402 ||||| || |||||||| ||||||||||| ||||| ||||||||| ||||| ||||| Sbjct 3 TGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCC 62 Query 68403 GCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || | || || || || || || |||||||||||||| || ||||| Sbjct 63 GAGGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 121 >seq2 Length=216475 Score = 113 bits (124), Expect = 8e-20 Identities = 126/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Minus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 |||| |||| ||| ||||| ||||| || || |||||||||||| | ||||||||||| Sbjct 76055 TGAC-CCCGACTTTTGGTAATCCGAAACACGCTTCTCGAAGAAGTTTGTCTTGCCCTCGA 75997 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054 | || || | | ||| ||||||||||||||||||||| ||| || |||||||| || Sbjct 75996 GCGAGATCATATTCATAAAGTCAAAGGGGTTCTCGGCGTTCCAGAC--CTTGGGGTTGCC 75939 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA-CTGG 10097 | || || | ||||| || |||||||||||||| |||| Sbjct 75938 CAAGGCGACCAACAATCGGTCGGCGACGAACTCGATGTATCTGG 75895 >seq178 Length=41210 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| | | ||| | || ||||| | ||| ||||||||||| Sbjct 25617 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 25558 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || || ||||| |||||||| | |||| |||||| |||||| || | || ||| Sbjct 25557 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTCTCAACCTTG-CCTTCGTC 25499 Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 ||| | |||||| || | || |||||| || || | || || ||||| |||||||| Sbjct 25498 GGGTACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCC 25439 >seq154 Length=46214 Score = 87.8 bits (96), Expect = 3e-12 Identities = 447/710 (63%), Gaps = 2/710 (0%) Strand=Plus/Minus Query 175975 CCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGCT 176034 ||||||| || || ||||||||| ||| || |||| ||| | || |||| Sbjct 34888 CCTTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCC 34829 Query 176035 TCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTC 176094 | | ||| | || |||||| | ||||||||| || | | || |||| |||| Sbjct 34828 TTAAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTC 34769 Query 176095 CTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTT 176154 | || || ||| ||||| |||| | |||||| |||| | || | ||| | Sbjct 34768 CAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCT 34709 Query 176155 CAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAA 176214 | || | | || ||||| | |||||| | |||| | || || || ||||| | Sbjct 34708 CGATGCTTTGCCCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGGGATGGAAGA 34649 Query 176215 TATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGC 176274 || ||| ||| || | | |||||||| || | ||| || || ||| || | Sbjct 34648 CGCTACGCGTGATGGATGATACGTTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTAC 34589 Query 176275 CTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAAC 176334 | || || || || | ||| ||||| ||| || || | |||| ||| || || | Sbjct 34588 CACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACC 34529 Query 176335 CCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT 176394 | ||| | | ||| |||| |||| |||| ||| || | | | || ||||| || | Sbjct 34528 CGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGT 34469 Query 176395 AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGT 176454 | | | || ||| ||| ||| | || || |||| ||||| || || | | Sbjct 34468 ACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACT 34409 Query 176455 TGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCG 176514 ||||||| || ||||| | ||| || || ||||| | ||||| | ||| | Sbjct 34408 TGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATGACAG 34349 Query 176515 ACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAAT 176574 | ||||| || ||| | ||| | || || ||||| | || ||||| ||||||| Sbjct 34348 AGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAAT 34289 Query 176575 CCTCCACTGGAATCTTC-GTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGG 176633 |||| | || | |||| | || | |||||||| | |||| || |||| | || Sbjct 34288 CCTCGATCGGGA-CTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCTCGG 34230 Query 176634 AGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT 176683 ||||| ||| || | ||| ||| ||||||||| | | |||| || Sbjct 34229 AGCCATTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAAGGCCATGTCGAT 34180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921562471503440