Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq424 212 1e-49 seq2 95.1 2e-14 >seq424 Length=13803 Score = 212 bits (234), Expect = 1e-49 Identities = 783/1214 (64%), Gaps = 37/1214 (3%) Strand=Plus/Plus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 || ||||||||||||||||| ||||| ||||||||| | |||||||| ||| | Sbjct 10252 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCCTCGGGCGAATCG 10311 Query 221483 AAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGG 221540 || ||||| ||| || |||| | ||||||| || || || |||||||| ||||||| Sbjct 10312 AACGGCAT-CGCCAAGGCCATGAACG-CGTCGGCGAGACCTTGCACTCCGATGCCGATGG 10369 Query 221541 GCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCA 221600 | | ||| | |||||| ||| || |||||||| ||||||||||||| | Sbjct 10370 GGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGATAGTAGTTGACGTCGATGA 10429 Query 221601 GATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACA 221660 ||| | ||| | || || ||| || || |||||| || |||| || || Sbjct 10430 TGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC------TTAAAGT 10483 Query 221661 CCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGT 221720 | || ||||| | | || | | || | || ||| | || ||||| || Sbjct 10484 CGTACACGCCGTC--CTTGATGAAGCTCGGC-AACGCG--------ATCG-AGGCCAAGT 10531 Query 221721 TACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGC 221780 | || ||||| ||||||| | |||| |||||||| || || ||||| Sbjct 10532 TGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACG 10591 Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCA 221840 ||||||| || || || | || || || || || || || ||||| |||||||||| Sbjct 10592 ACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGTCTTTGTAGAGCA 10651 Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGC 221900 |||| || |||||| || | ||| || | |||||| || ||| || | | ||| Sbjct 10652 TAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGG 10711 Query 221901 TCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC---AA 221957 | ||| ||||| | ||||| |||||| || | | || || | | | Sbjct 10712 GGATCGTTTTCTTGGCGCGGCCCTC---CTTTTCGTA---TTTCTCGAACAAGGCGCGGA 10765 Query 221958 ACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT 222017 ||| || || || | |||| ||||| || |||||| || | ||| ||| | Sbjct 10766 ACTCCTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCAAT 10825 Query 222018 GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGAT 222077 | | | | ||| | || |||||| || || || ||||| ||||| ||||||| Sbjct 10826 CGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGAT 10885 Query 222078 CTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGT 222137 | | | || |||||| ||||| ||| || | || |||| || || || | || Sbjct 10886 CACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGT 10945 Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197 | |||||||||||||| || |||| || | || ||||| |||||||||||||| || | Sbjct 10946 CGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGT 11005 Query 222198 CCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257 | || | | | |||| ||| || || | || || | ||||| || | Sbjct 11006 CGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGC 11065 Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATA 222316 |||| ||||| ||||| | ||| || | | ||| ||| | || |||||| Sbjct 11066 CGTTTGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGATA 11124 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || |||||| || ||||| | ||||| |||| || ||||| ||||| || || Sbjct 11125 CCGCCGGCGGTCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATC 11184 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 || || ||||| | | | ||| ||||| ||||| | ||| | | | | | |||| Sbjct 11185 GAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCG 11244 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 || || ||||| || |||||| |||||||||| | ||||| || | ||||| || Sbjct 11245 TTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGC 11304 Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGG 222556 | ||| | | |||| || ||||| || | |||| | |||| ||||| || Sbjct 11305 AAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGC 11364 Query 222557 GGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGA 222614 || | || | |||| | | | || |||| ||| || ||| || || |||| Sbjct 11365 GGGCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGTTCGAGCGTTTTGA 11422 Query 222615 ACCCAAAGTAGTTG 222628 | |||||||||||| Sbjct 11423 AGCCAAAGTAGTTG 11436 >seq2 Length=216475 Score = 95.1 bits (104), Expect = 2e-14 Identities = 156/224 (70%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547 ||||||||||||| | || ||||||||||||||||| || ||| |||||||||| Sbjct 74850 GTACAAGAAGGCTGAGGCATCTTTTTGGACCGCCGAAGAGATGGACCTGTCCAAGGACAT 74909 Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602 | ||| |||| || |||| | || ||||||| | || || | |||| | Sbjct 74910 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 74967 Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || || || || ||||| || || || || |||||||| || |||| ||||| | | Sbjct 74968 GCCTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGATTCTCTGGT 75027 Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 || || |||| | ||||| || ||||||||||| || || Sbjct 75028 GAGGTCCAGTCAGCCGAGGCTCGATGCTTCTACGGTTTTCAAAT 75071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928784401866880