Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq424 187 3e-42 seq196 129 7e-25 seq177 105 8e-18 >seq424 Length=13803 Score = 187 bits (206), Expect = 3e-42 Identities = 560/858 (65%), Gaps = 15/858 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| ||||| ||||||||||||| | |||||||| || Sbjct 11367 CCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGT 11308 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| || | ||| || |||||| | | || | ||||| | || || ||||| Sbjct 11307 CTTGCAGTCGTACAACCTTATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 11248 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || || ||||| || | | ||||| || Sbjct 11247 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGA 11188 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | || || || | || |||| | ||| |||| ||||| ||| || || Sbjct 11187 TTCGATTGAAGGCATTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 11128 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 ||||| || || |||||| | | | || | ||| || ||| || ||| Sbjct 11127 CGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACA 11070 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || ||| | || ||||| || || | ||| ||| |||||||| Sbjct 11069 AACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 11010 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | |||| || ||||| | || || ||||| ||||| | || || ||| Sbjct 11009 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 10953 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | || ||||| || | || ||||| || | || || | ||| Sbjct 10952 CACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTTCGC 10893 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | | || |||||||| || ||||||||| |||| || |||| Sbjct 10892 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCGAGGCC 10833 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 | || | ||| |||| ||||| || | | | || || || ||| ||| | || Sbjct 10832 GCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGC 10773 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 |||||||| ||| | | | || || ||| ||||||| | ||||| || | Sbjct 10772 GAGGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATC 10713 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || || || | | ||||| | || ||||| || | ||| || ||||| | || | Sbjct 10712 CCCGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCTTT 10654 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||| ||||| || || |||||||| |||||||||||| | || || ||||| Sbjct 10653 TATGCTCTACAAAGACGCCGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGATCAA 10594 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || || ||||| || || | |||||| | | ||| ||| || || || Sbjct 10593 GTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTG 10534 Query 76042 CAATTTGGCATCAATCGC 76059 ||| ||||| || ||||| Sbjct 10533 CAACTTGGCCTCGATCGC 10516 >seq196 Length=36967 Score = 129 bits (142), Expect = 7e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177747 AATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCC 177806 ||||||| | ||||||||| | ||| || | ||| || ||||||||||| | ||| || Sbjct 25917 AATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGATACC 25976 Query 177807 GGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAA 177866 | ||| || ||||| || || | || ||||| || ||||||| ||||| ||| ||| Sbjct 25977 GTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACGATCCAGTAGGCGTACAA 26036 Query 177867 TTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTC 177926 |||| ||| || || || || ||||||||||| ||| ||| | ||| || || || Sbjct 26037 CTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGGTCTC 26096 Query 177927 TCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| ||| ||||| ||||||||||| Sbjct 26097 GACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTA 26135 >seq177 Length=41378 Score = 105 bits (116), Expect = 8e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 35327 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 35386 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 35387 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 35446 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 35447 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 35506 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| |||||| || ||||| ||||| Sbjct 35507 ACAACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 35544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596530808061760