Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq63 187 5e-42 seq46 187 5e-42 seq147 179 8e-40 seq39 176 9e-39 seq468 109 1e-18 seq178 89.7 1e-12 seq154 86.0 1e-11 >seq63 Length=84378 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 76870 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 76929 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || ||||| | |||||||||||| || Sbjct 76930 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 76989 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 76990 AATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 77049 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| ||||| || || |||||||| Sbjct 77050 CTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 77097 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||| ||||| || || Sbjct 77098 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGC 77157 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 77158 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 77217 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 77218 AATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 77277 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 77278 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 77325 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 76642 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGC 76701 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 76702 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGG 76761 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | ||||| |||||||| | ||||| Sbjct 76762 AATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 76821 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 76822 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 76869 >seq46 Length=101831 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 122 ACCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 181 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || ||||||||||| || || ||||| || Sbjct 182 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGG 241 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 242 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 301 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 302 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 349 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||| Sbjct 12 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 71 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || |||||||| || |||| ||||| ||||| || ||||| Sbjct 72 ACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 121 >seq147 Length=48581 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || ||||||||||||||||| || Sbjct 44740 ACCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 44681 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 44680 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGG 44621 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 44620 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 44561 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| ||||| ||||| ||||| | ||||| || || || |||| Sbjct 44560 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 44514 >seq39 Length=108268 Score = 176 bits (194), Expect = 9e-39 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || |||| || | || || ||||||||||||||||| || Sbjct 52864 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 52923 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 52924 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 52983 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 52984 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 53043 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | |||||| || || || ||| Sbjct 53044 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 53088 >seq468 Length=11859 Score = 109 bits (120), Expect = 1e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 175 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 116 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||||||||| || || || || || |||||||| || || ||||| ||| Sbjct 115 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGA 56 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 || ||||||||||| || ||||| || || || | ||||| || ||||| Sbjct 55 ATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATCGTATCCGA 6 >seq178 Length=41210 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | || || || |||||||| |||||||| Sbjct 25617 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 25558 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || |||||||| || | ||||| || || |||||| Sbjct 25557 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTC 25516 >seq154 Length=46214 Score = 86.0 bits (94), Expect = 1e-11 Identities = 432/679 (64%), Gaps = 12/679 (2%) Strand=Plus/Minus Query 273516 TTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCC 273575 ||||| || |||||| || | ||| | | |||| ||||| ||||| ||| Sbjct 34886 TTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCCTT 34827 Query 273576 ACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCA 273635 | || | | |||||| | ||||||||| | || || | | ||| || || ||| Sbjct 34826 AAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTCCA 34767 Query 273636 ATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCA 273695 ||||| || ||||| |||| | | ||||| || |||| || | ||||| Sbjct 34766 ATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCTCG 34707 Query 273696 ATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCA-TCATCCGTATCAACGAAAAC 273754 || | | ||||| |||| ||||| ||| | | || ||||| | | ||| || Sbjct 34706 ATGCTTTGCCCATCATCGTTGAGGTA-TTCGAGCACGCTGTCATCAGCGGGATGGAAGAC 34648 Query 273755 CTTTCGCGTCT--GAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTG 273812 | ||||| || ||| | |||||||| ||||| | || || ||| || Sbjct 34647 GCTACGCGTGATGGATGATACG--TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTA 34590 Query 273813 CCACCTTGCAGCCTCGAACCAAACTGACC-CTCGGGCAGTAGCCAGTTTATGTTGTTGCT 273871 ||||||||||| | || |||||| ||||| ||||| | || ||| | ||||||| Sbjct 34589 CCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCG-AGAATGTTGAGGTTGTTGGA 34531 Query 273872 ACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTG 273931 |||||| | | || |||| | ||| || || || | | || ||||| || Sbjct 34530 CCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATG 34471 Query 273932 ATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAA 273991 || || ||| ||||||| ||||| | || || | ||||| | || |||||| Sbjct 34470 GTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAA 34411 Query 273992 GTTTCGCTTGAA--TGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACG 274049 || |||||||| | || |||| ||||| || || ||||| |||||||||| | Sbjct 34410 CTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATG 34353 Query 274050 ACCGATGGAATACTGCGTTCCAAATCATACCGAGAGAACAAAATCAGTTCCTTGTCAATG 274109 || || |||||| ||| | || | ||||| | |||| ||||||| ||| Sbjct 34352 ACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATG 34293 Query 274110 AAGTCAGGGACGGGAACCTCGGGCTTCTTGTGGTCGAGCTGATTACCGGGTTCGTATGCC 274169 || || || || || |||| | |||||||||| | | ||||| || | | Sbjct 34292 AAATCCTCGATCGGGACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCT 34233 Query 274170 AACATCCACTCCTTGCGGT 274188 | ||| |||||||||| Sbjct 34232 CGGAGCCATTCCTTGCGGT 34214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046669434178108