Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq36 100 6e-16 >seq36 Length=1841281 Score = 100 bits (110), Expect = 6e-16 Identities = 670/1051 (64%), Gaps = 59/1051 (6%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | | ||||| Sbjct 673015 TTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTACCACCTTGCAGACGAGTACCAAAT 672956 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 672955 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 672898 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 672897 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 672838 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 672837 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 672781 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| || ||||| ||||||| |||||| || || ||| | Sbjct 672780 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGGATAGAGCGCACGT 672721 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| || || | | || |||| || ||| Sbjct 672720 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATAAAATCCTCGATCGGG-ACTTCG 672662 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 672661 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 672604 Query 282151 CCTCGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTC-------TCCAGAATCAGAA 282203 |||||| |||||||||| | || || | ||| ||| | || ||| Sbjct 672603 TGTCGGCCTTCTTCTTGTTGAAGGCCATGTCAATCAACTCGCGCTCTTCCTGCGTC-GAA 672545 Query 282204 GTCCACGTAAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCTTG---GCATCA 282260 | | |||| | | | | | || ||||| ||||| |||| || || Sbjct 672544 GGGC---GGAACGGCAAGCGATGCTTGTCCATGTTGCCAAAGTA---CTTGACCGCGTCC 672491 Query 282261 GTGCTGGAACTCGTACCGAGACCCTTGTAATACTTGATTTGATACTTAGAATAATCCTTC 282320 || | ||||||||| | |||||| | |||||||| | | | | || | || Sbjct 672490 CTGGCGTCACTCGTACCCAATCCCTTGAAGTACTTGATGCGCCATCCACGACCAT-CATC 672432 Query 282321 GTGGTCTT-CACCCAATCCTCGTAATCCGGAAGACTATAAAATTCGCGAACGTCCT--TT 282377 | |||| | ||| | |||||| | |||| | ||||| | ||| |||| || Sbjct 672431 GGTCTCTTCCTTCCATTGCTCGTACTGAGGAATTGTGAAAAAT--GACAAC-TCCTTGTT 672375 Query 282378 CCTTTCTTGG-CGAC--CACGATAGGTGTGATGAACTTCTTCAAGAA-ACCTGGAATTT- 282432 || ||||| || | ||||| || |||||||||| |||||| ||| | ||| Sbjct 672374 CC--CCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAGCAAGAAGCCCTTCAGTTTG 672317 Query 282433 --CTAGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGT 282490 | |||| || || ||| || || ||||| |||| ||||| ||||| | Sbjct 672316 AGCAAGGA----AGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGA 672261 Query 282491 TCCGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTC 282550 ||| || |||| |||| ||||||||| | | ||||| | || || ||| Sbjct 672260 TCCATCGTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTC 672201 Query 282551 TTTGTACACTTTACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTT 282610 |||| ||||| || || | |||||| || || |||| ||| || || | || Sbjct 672200 GGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGCTTGAATCTCGACATT 672141 Query 282611 CTTTGTGA-TACTTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAA 282669 | || ||| | | | || || || ||||| |||||||| || || | ||| | Sbjct 672140 ATCGAGGAGGGCTTTGC-CCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGA 672082 Query 282670 AAACACCATATCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGC 282727 | |||||||| | || |||||||| |||| ||| || | | || || | ||| || Sbjct 672081 AGACACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTG--GC 672024 Query 282728 GGAATCTCCCTCCGTCAAGATGAGAGTACAC 282758 ||||||||| || ||||||||||| || ||| Sbjct 672023 GGAATCTCCTTCGGTCAAGATGAGCGTGCAC 671993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823024157360