Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq45 185 9e-42
seq36 145 8e-30
seq20 145 8e-30
seq55 140 3e-28
>seq45
Length=1665130
Score = 185 bits (204), Expect = 9e-42
Identities = 175/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706
|||||| ||||||||||| || || ||||||| ||| ||| ||||| ||||||||||||
Sbjct 331838 GTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 331779
Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763
| ||||||||| | | | | | |||||||| | |||||| |||||| || ||
Sbjct 331778 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 331719
Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823
||||||||||||| ||||||||| ||||||||||| |||||||||| ||| || ||
Sbjct 331718 CTTTTTCGCCGCCTCCGACGGCATTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGA 331659
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866
||| ||| |||||||| || ||||||||||| || || |||
Sbjct 331658 GGTCCAGTCCGCCGAGGCTCGATGCTTCTACGGTTTCCAAATC 331616
>seq36
Length=1841281
Score = 145 bits (160), Expect = 8e-30
Identities = 170/227 (75%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
||||||| ||||| || || ||||||||||| ||||||||| |||| ||||| | |||
Sbjct 1559913 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1559854
Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | |||| ||||| || || | ||||| || ||||||||| | ||||||
Sbjct 1559853 ACACGATCGACAACG-TCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 1559795
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| || ||||| ||||| || || | ||||| ||| || ||||||
Sbjct 1559794 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 1559735
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| |||||| | ||||| || | ||| | ||| || | || ||
Sbjct 1559734 ATCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGG 1559688
Score = 105 bits (116), Expect = 7e-18
Identities = 97/123 (79%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145
|||||| |||| ||||||||||| ||||| ||||||||||||||||| |||| ||||
Sbjct 398458 TTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAAC 398399
Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205
|||||||| ||| | ||||| ||||| ||| ||| || ||| | |||||| |||
Sbjct 398398 GAGCTCATATCCCGCGACGAAGGTCTTCATACCGAATTCGCCGTCCTCTTGTTCAGTCAT 398339
Query 117206 TTG 117208
|||
Sbjct 398338 TTG 398336
>seq20
Length=1456699
Score = 145 bits (160), Expect = 8e-30
Identities = 156/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || ||||| || ||||| |||| || || || |
Sbjct 547010 ATGCAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 547069
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| |||||||| ||| | |||||
Sbjct 547070 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 547128
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| ||||||| ||||||||| ||||| || || | || || ||| |||||||||
Sbjct 547129 ACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 547188
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||||||||
Sbjct 547189 CATCCAGAAGGAGTCGACGCTGCA 547212
Score = 123 bits (136), Expect = 3e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || ||||| || ||||| | || || || || |
Sbjct 546782 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 546841
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || |||| || || |||||||| ||| | |||||
Sbjct 546842 GACACGATCGACAACG-TAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCA 546900
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| ||||||| ||||||||| ||||| || || | || || ||| ||| |||||
Sbjct 546901 ACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAA 546960
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||| | |||||||| | ||| | |||
Sbjct 546961 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGC 546997
>seq55
Length=539833
Score = 140 bits (154), Expect = 3e-28
Identities = 168/226 (74%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 40681 CTCCGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 40740
|| |||| | |||||| ||||| || || || |||||||| || |||||| |||| |||
Sbjct 107296 CTGCGAATCAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTC 107355
Query 40741 GAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCC 40799
|| | |||||| | | |||| ||||| || || | ||||| || ||||||||
Sbjct 107356 GAGTCGTCCGACACGATCGACAACG-TCAAGACCAAGATCCAAGACAAGGAAGGCATCCC 107414
Query 40800 CGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAA 40859
| | ||||||||||| ||||||| ||| ||||| ||||| || || | |||||| |
Sbjct 107415 CCCAGACCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGC 107474
Query 40860 CGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||||| |||||| | || || || | ||| | |||
Sbjct 107475 CGACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGC 107520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218736302720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |