Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq20 127 2e-24
>seq20
Length=1456699
Score = 127 bits (140), Expect = 2e-24
Identities = 170/234 (73%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
||||| || || | | ||||| |||||| || | || |||||| ||||| ||||||
Sbjct 789621 TATTGACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAA 789562
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| || || || || | || || |||||||| || ||||| || | ||||||||||||
Sbjct 789561 TCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCT 789502
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGA 43129
| || | || ||||||| | ||| | || || |||| | | | |||||| ||
Sbjct 789501 GGGGGAATGCCTTCCTTGT-CTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGA 789443
Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || |||| ||||| || |||||||| |||||||| || |||||||||||
Sbjct 789442 CTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
Score = 118 bits (130), Expect = 1e-21
Identities = 171/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009
||| ||||| |||| | ||| | |||||| |||| || |||||| || || |||||
Sbjct 547243 CTACTGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 547184
Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069
|| || || || || | || || |||||||| || ||||| ||||| || || |||||
Sbjct 547183 GTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTC 547124
Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTC 43127
| || | || |||||||||| ||| | || | |||| ||| | | | ||||||
Sbjct 547123 TGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAG 547066
Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || |||| |||||| || ||||| || | ||||| || |||||||||||
Sbjct 547065 GACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| || |||||| || || |||||||| || || || || | || ||
Sbjct 546991 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCCTC 546932
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|||||||| || ||||| ||||| || || ||||| | || | || |||||| ||| |
Sbjct 546931 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCC-T 546873
Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152
|| | || | | ||| | | | |||||| || || || || | |||||| || |
Sbjct 546872 GAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCT 546813
Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| |||| ||||| ||||||||||||||
Sbjct 546812 TGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782
Score = 105 bits (116), Expect = 8e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | || |||||| ||||| |||||||| || || || || |
Sbjct 789376 ACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCC 789317
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || || || ||||| || || ||||| | || | | ||||||
Sbjct 789316 ATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTT 789257
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || |||| | | | |||||| || || || |||| |||||
Sbjct 789256 GTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGAT 789197
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||||||| |||||||| || |||||||||||
Sbjct 789196 CGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | || |||||| ||||| |||||||| || || || || |
Sbjct 789148 ACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCC 789089
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || |||||||| || || || ||||| || || ||||| | || | | ||||||
Sbjct 789088 ATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTT 789029
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || |||| | | | |||||| || || || |||| |||||
Sbjct 789028 GTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGAT 788969
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || | ||||| || |||||||||||
Sbjct 788968 GGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817085364160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |