Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq41 150 4e-31 seq20 89.7 1e-12 >seq41 Length=447122 Score = 150 bits (166), Expect = 4e-31 Identities = 465/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Minus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 424362 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 424303 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| ||||| ||| || || | || || || |||||| Sbjct 424302 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 424243 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| || |||||| | ||||| || || ||||| || ||| | ||| Sbjct 424242 GTCGCCGAACGCCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 424183 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 424182 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 424123 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| ||||| || || | | Sbjct 424122 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTGTTTCCTGGTCAC 424064 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 |||| | |||||||| |||| ||||| || |||||||| | ||||| ||| || Sbjct 424063 CATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCTCAT 424007 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| || || |||||| | | || ||||||||| |||| || || || Sbjct 424006 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTA 423947 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || || || || | | || ||||| ||| | || || || | Sbjct 423946 CATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 423887 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 |||||| | | | || |||| | || | || || | ||||| || || | Sbjct 423886 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 423827 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || |||||||| || | || |||||||||||| | |||||| ||||||| || Sbjct 423826 CGAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 423767 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | |||| |||| ||| || Sbjct 423766 GGAGGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCG 423707 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| | |||| ||| | || | | || | || ||||| | |||| Sbjct 423706 TGTCGAGGCCGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTC 423652 >seq20 Length=1456699 Score = 89.7 bits (98), Expect = 1e-12 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 115388 TCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGT 115447 |||| |||| || || || |||| ||||||||||| |||||||||||| || | || Sbjct 399487 TCGAGTACCTCAAGATGGCGCATCGACTCTGAATCGGCTCGATGATTTTGTTGCTCTGGT 399428 Query 115448 TGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCT 115507 |||| | | | ||| || || ||| | ||| | | ||||| ||| || ||||| | Sbjct 399427 TGCACGCAAAGGCGAAGCGAGTGGTGTTGGAGAAGATTTCCATCGTCCTGCGGAGCGCTT 399368 Query 115508 GGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 | || || || ||||||||||| || |||||||| | ||| | ||| Sbjct 399367 GCTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 399319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765409450496