Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq41 150 4e-31
seq20 89.7 1e-12
>seq41
Length=447122
Score = 150 bits (166), Expect = 4e-31
Identities = 465/715 (65%), Gaps = 11/715 (2%)
Strand=Plus/Minus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| || ||||| | ||||| |
Sbjct 424362 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 424303
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| ||||| ||| || || | || || || ||||||
Sbjct 424302 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 424243
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| ||||| || |||||| | ||||| || || ||||| || ||| | |||
Sbjct 424242 GTCGCCGAACGCCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 424183
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | || |||||| | ||| || |||| | || || ||| |
Sbjct 424182 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 424123
Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056
|||||||||||||||||||| || | || || ||||| ||||| || || | |
Sbjct 424122 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTGTTTCCTGGTCAC 424064
Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113
|||| | |||||||| |||| ||||| || |||||||| | ||||| ||| ||
Sbjct 424063 CATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCTCAT 424007
Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173
|| || ||| || || |||||| | | || ||||||||| |||| || || ||
Sbjct 424006 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTA 423947
Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233
|||| || || || || | | || ||||| ||| | || || || |
Sbjct 423946 CATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 423887
Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290
|||||| | | | || |||| | || | || || | ||||| || || |
Sbjct 423886 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 423827
Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350
|| |||||||| || | || |||||||||||| | |||||| ||||||| ||
Sbjct 423826 CGAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 423767
Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410
| | | || ||||| ||||||| | || ||| | |||| |||| ||| ||
Sbjct 423766 GGAGGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCG 423707
Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465
||| |||||| | |||| ||| | || | | || | || ||||| | ||||
Sbjct 423706 TGTCGAGGCCGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTC 423652
>seq20
Length=1456699
Score = 89.7 bits (98), Expect = 1e-12
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 115388 TCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGT 115447
|||| |||| || || || |||| ||||||||||| |||||||||||| || | ||
Sbjct 399487 TCGAGTACCTCAAGATGGCGCATCGACTCTGAATCGGCTCGATGATTTTGTTGCTCTGGT 399428
Query 115448 TGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCT 115507
|||| | | | ||| || || ||| | ||| | | ||||| ||| || ||||| |
Sbjct 399427 TGCACGCAAAGGCGAAGCGAGTGGTGTTGGAGAAGATTTCCATCGTCCTGCGGAGCGCTT 399368
Query 115508 GGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556
| || || || ||||||||||| || |||||||| | ||| | |||
Sbjct 399367 GCTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 399319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765409450496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |