Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq45 113 7e-20 seq41 87.8 3e-12 >seq45 Length=1665130 Score = 113 bits (124), Expect = 7e-20 Identities = 175/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||| | |||||| ||||| |||| ||||||||||| | ||||||| | || || Sbjct 331849 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTG 331790 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||||||||| || |||| ||||| || | | | || ||||| | || || || Sbjct 331789 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 331731 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||| | | ||||| || |||| |||||| || || |||||||| || || | || Sbjct 331730 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATTGTCAACGAGAACTTGGTCGAGCG 331671 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||||||| ||| | ||| || | |||| ||| ||||| ||||| ||||||||||| Sbjct 331670 ATTCTCTGGTGAG--GTCCAGTCCGCCGAGG-CTCGATGCTTCTACGGTTTCCAAATCAT 331614 Query 125255 GAT 125257 ||| Sbjct 331613 GAT 331611 >seq41 Length=447122 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 ||||||||||| ||||||||| | || ||||| | |||||| || | ||||| || Sbjct 422481 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCGGCCGATCGA 422422 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAG- 98155 || | || ||| |||||| |||||| |||| | || ||| ||||||| | | | Sbjct 422421 GGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCGACGATGGC 422363 Query 98156 TCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215 | | || ||||| ||||| |||| ||||| || || ||||||||||||||||| Sbjct 422362 ACAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGCATGTACTA 422303 Score = 84.2 bits (92), Expect = 3e-11 Identities = 333/516 (65%), Gaps = 6/516 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || |||||| || | | ||| | || || |||||| | | ||||| | | || Sbjct 423936 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGC 423877 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| || || ||||| || || || || || | || ||||| | || || ||| Sbjct 423876 TACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGG 423817 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| || || || | || | ||||| ||| ||| || |||| || Sbjct 423816 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGC 423757 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | || | || | ||| |||||| | || ||| |||| ||| |||| ||| | | | Sbjct 423756 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 423697 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 | || | ||| ||| | ||||||| | ||||| || ||| || ||| Sbjct 423696 GCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 423637 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGT 97165 |||||||| ||| || | | ||||| | |||||||| | | |||||| | Sbjct 423636 GAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA-T 423578 Query 97166 CGATGCACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | || | | | || ||| | || | || ||| || ||||| || || || | |||| Sbjct 423577 CCCCGCGCAAAAGCTTTGGTACGCGATTCTTGA-AGCCCAGGTCGAAACCGGCAACCCGT 423519 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATC 97283 ||| ||||||||||| ||| || | || | | |||||| || | ||||| ||| Sbjct 423518 TCATGCTCTACAAGGACGCCG-CAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATC 423460 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||| || || ||||||| || || | |||||| Sbjct 423459 AAGTCGTCGAACTTGTGCACCGAGATCATCGAGTAC 423424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058533046720