Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq45 113 7e-20
seq41 87.8 3e-12
>seq45
Length=1665130
Score = 113 bits (124), Expect = 7e-20
Identities = 175/243 (72%), Gaps = 8/243 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| ||||| |||| ||||||||||| | ||||||| | || ||
Sbjct 331849 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACTTG 331790
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 331789 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 331731
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | ||||| || |||| |||||| || || |||||||| || || | ||
Sbjct 331730 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATTGTCAACGAGAACTTGGTCGAGCG 331671
Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||||||| ||| | ||| || | |||| ||| ||||| ||||| |||||||||||
Sbjct 331670 ATTCTCTGGTGAG--GTCCAGTCCGCCGAGG-CTCGATGCTTCTACGGTTTCCAAATCAT 331614
Query 125255 GAT 125257
|||
Sbjct 331613 GAT 331611
>seq41
Length=447122
Score = 87.8 bits (96), Expect = 3e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||| | || ||||| | |||||| || | ||||| ||
Sbjct 422481 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCGGCCGATCGA 422422
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAG- 98155
|| | || ||| |||||| |||||| |||| | || ||| ||||||| | | |
Sbjct 422421 GGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCGACGATGGC 422363
Query 98156 TCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215
| | || ||||| ||||| |||| ||||| || || |||||||||||||||||
Sbjct 422362 ACAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGCATGTACTA 422303
Score = 84.2 bits (92), Expect = 3e-11
Identities = 333/516 (65%), Gaps = 6/516 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| |||||| || | | ||| | || || |||||| | | ||||| | | ||
Sbjct 423936 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGC 423877
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| || || ||||| || || || || || | || ||||| | || || |||
Sbjct 423876 TACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGG 423817
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| || || || | || | ||||| ||| ||| || |||| ||
Sbjct 423816 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGC 423757
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | || | || | ||| |||||| | || ||| |||| ||| |||| ||| | | |
Sbjct 423756 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 423697
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
| || | ||| ||| | ||||||| | ||||| || ||| || |||
Sbjct 423696 GCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 423637
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGT 97165
|||||||| ||| || | | ||||| | |||||||| | | |||||| |
Sbjct 423636 GAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA-T 423578
Query 97166 CGATGCACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| || | | | || ||| | || | || ||| || ||||| || || || | ||||
Sbjct 423577 CCCCGCGCAAAAGCTTTGGTACGCGATTCTTGA-AGCCCAGGTCGAAACCGGCAACCCGT 423519
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATC 97283
||| ||||||||||| ||| || | || | | |||||| || | ||||| |||
Sbjct 423518 TCATGCTCTACAAGGACGCCG-CAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATC 423460
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
||| || || ||||||| || || | ||||||
Sbjct 423459 AAGTCGTCGAACTTGTGCACCGAGATCATCGAGTAC 423424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058533046720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |