Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq36 176 7e-40
seq33 154 2e-33
>seq36
Length=1841281
Score = 176 bits (194), Expect = 7e-40
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| ||||| || ||||| ||||||||||||||
Sbjct 1030956 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATTCGCCGTCTCGCTCGTCGTGGTGGT 1031015
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || ||| |||| ||||||| || | || |||||||||||||
Sbjct 1031016 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACCCGAGGCGTCCTGAAGATCTTCCTT 1031075
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| ||||||||||| || || ||||| ||||||
Sbjct 1031076 GAGAACGTCATCCGTGACTCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1031135
Query 16637 TCCATGGATATCGTCTATGC 16656
|| ||||| ||||||| ||
Sbjct 1031136 TCGCTGGATGTCGTCTACGC 1031155
Score = 168 bits (186), Expect = 1e-37
Identities = 179/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || ||||| ||||| || |||||||||||
Sbjct 1555294 CGTGACAACATCCAGGGTATCACCAAGCCGGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1555353
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
|| |||||| |||| || || |||| ||||||| || | ||| | ||||||||||||
Sbjct 1555354 GTGAAGCGTATCTCCGGTCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 1555413
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| |||| | || ||| ||||||||||| || || ||||| ||||||
Sbjct 1555414 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACC 1555473
Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| | ||| ||||||| || | || || ||||| | | | || ||||| ||
Sbjct 1555474 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1555529
Score = 168 bits (186), Expect = 1e-37
Identities = 179/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || ||||| ||||| || |||||||||||
Sbjct 1630016 CGTGACAACATCCAGGGTATCACCAAGCCGGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1629957
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
|| |||||| |||| || || |||| ||||||| || | ||| | ||||||||||||
Sbjct 1629956 GTGAAGCGTATCTCCGGTCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 1629897
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| |||| | || ||| ||||||||||| || || ||||| ||||||
Sbjct 1629896 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACC 1629837
Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| | ||| ||||||| || | || || ||||| | | | || ||||| ||
Sbjct 1629836 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1629781
>seq33
Length=2733711
Score = 154 bits (170), Expect = 2e-33
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| ||||||||||| || ||||||||||| || ||||| ||||| || |||||||||||
Sbjct 606083 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 606024
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || | |||| || |||| ||| | ||| | |||||||| |||
Sbjct 606023 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTTCTC 605964
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| ||||||
Sbjct 605963 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 605904
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | ||| |||| || ||
Sbjct 605903 TCGCTCGATGTCGTTTACGC 605884
Score = 154 bits (170), Expect = 2e-33
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| ||||||||||| || ||||||||||| || ||||| ||||| || |||||||||||
Sbjct 665559 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 665618
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || | |||| || |||| ||| | ||| | |||||||| |||
Sbjct 665619 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTTCTC 665678
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| ||||||
Sbjct 665679 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 665738
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | ||| |||| || ||
Sbjct 665739 TCGCTCGATGTCGTTTACGC 665758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075134169896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |