Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq20 140 3e-28
seq55 113 4e-20
seq36 107 2e-18
>seq20
Length=1456699
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || || || || || ||||| || || |||| || || || || ||
Sbjct 788931 AGATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCT 788990
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || |||| || || |||||||||||||||||||| || || |
Sbjct 788991 CGGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACC 789050
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|||||||||| || ||||| ||||| ||| | |||||| |||||| || | |||||||
Sbjct 789051 AACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACA 789110
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||| || || || || | || || || | || | ||||| |||
Sbjct 789111 ACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGGT 789160
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || ||| |||| || || || || || |
Sbjct 789161 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789220
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || |||||||||||||||||||| || || |||
Sbjct 789221 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789280
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| ||||| ||| | |||||| |||||| || | |||||||||
Sbjct 789281 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789340
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 789341 ATTCAGAAGGAGTCGAC 789357
Score = 129 bits (142), Expect = 5e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| ||||| || || |||||||| || ||| |||| ||||| || || ||
Sbjct 546780 AGATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCT 546839
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | | || || ||||| || |||||||| ||||| || || |
Sbjct 546840 CGGACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACC 546899
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|||||||||| || || || ||||| ||| | |||||| ||| || || |||||||||
Sbjct 546900 AACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACA 546959
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || || || || ||
Sbjct 546960 ACATCCAGAAGGAGTCGAC 546978
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || || || || ||| |||| || || || || || |
Sbjct 547010 ATGCAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 547069
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||| ||||||||||| ||||| || || |||
Sbjct 547070 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 547129
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || || ||||| ||| | |||||| ||| || || |||| ||||||
Sbjct 547130 CAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAAC 547189
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 547190 ATCCAGAAGGAGTCGAC 547206
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || ||| |||| || || || || || |
Sbjct 789389 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789448
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || |||||||||||||| || ||||| || || ||
Sbjct 789449 GACACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 789508
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | |||||| |||||| || | |||||||||
Sbjct 789509 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789568
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || | || || || |||| | || || |||
Sbjct 789569 ATTCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 789616
>seq55
Length=539833
Score = 113 bits (124), Expect = 4e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
|||||| || || || ||| | || || || ||| |||| || || || || | ||||
Sbjct 107307 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 107366
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
|| | ||| | |||| || || ||||||||||| || || || || || || ||
Sbjct 107367 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 107426
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
|||||| || || |||||||| ||| | |||||| ||||||| | |||| ||||||||
Sbjct 107427 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 107486
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||| | || || ||
Sbjct 107487 CCAAAAGGAGTCGACCCTCCACTTGGT 107513
>seq36
Length=1841281
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| || || || || | || || || || |||| || || || || | |||
Sbjct 1559913 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1559854
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| || | ||| | |||| || || || |||||||| || || || ||||| || |
Sbjct 1559853 ACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGC 1559794
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
||||||| || ||||||||||| ||| | |||||| |||||| || | ||||||||||
Sbjct 1559793 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACA 1559734
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||||| || || || | || || || | || |||| || |||
Sbjct 1559733 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGT 1559687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727631688680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |