Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq34 223 6e-53
seq36 196 9e-45
seq45 192 1e-43
seq20 178 2e-39
seq55 172 1e-37
seq51 93.3 8e-14
>seq34
Length=727289
Score = 223 bits (246), Expect = 6e-53
Identities = 304/419 (73%), Gaps = 4/419 (1%)
Strand=Plus/Minus
Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305
||| ||||| ||||||| | ||||| ||||| ||||| || |||||||| ||||| ||
Sbjct 66533 CTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGCTTGGC 66474
Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364
|||||||| |||||| | ||||| | ||| | |||||| | | || || | | | |
Sbjct 66473 CTCCATGTTGCCGAGGTAAAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 66415
Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424
| | || || | || || || || ||||| | ||| |||||||||||| | ||
Sbjct 66414 GGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 66355
Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484
|||||||||| ||| ||||| | || | ||| ||||||||| ||| ||||| | ||
Sbjct 66354 TGCCGTTGCAGGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGT 66295
Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544
||| ||| || ||| |||| || ||||| || | |||||| ||||| |||||||
Sbjct 66294 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGTGTCGTCTCGGATTGAGGGG 66235
Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603
|||| ||| ||||| | | |||||||||||| |||||||| || | || ||
Sbjct 66234 TTTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTAAAAGCGGACGTGCTTGG 66175
Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662
|| || |||||| ||||||| || ||||||| ||| || ||||| | ||| || |||||
Sbjct 66174 TCAAG-CCGCAGGTTCGGATCGCGTCGAGCAGACGCAGTGTTCCAAGGCCGTCGACGTC 66117
>seq36
Length=1841281
Score = 196 bits (216), Expect = 9e-45
Identities = 179/226 (79%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| ||||| ||||| ||||||||||| ||||| | |
Sbjct 1559688 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCG 1559747
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| ||||| || ||||| | ||| |||||||| ||
Sbjct 1559748 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 1559807
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 1559808 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 1559867
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460
|| | ||||||||| || |||||||||||||||||||| || ||||
Sbjct 1559868 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1559913
Score = 87.8 bits (96), Expect = 3e-12
Identities = 447/710 (63%), Gaps = 2/710 (0%)
Strand=Plus/Minus
Query 175975 CCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGCT 176034
||||||| || || ||||||||| ||| || |||| |||| | || ||||
Sbjct 673278 CCTTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCGCCCCTCATCTTGCGCC 673219
Query 176035 TCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTC 176094
| | ||| | || |||||| ||||||||||| || | | || |||| ||||
Sbjct 673218 TTAAGTTGGCCACAATATCCGTGGGGTTGTAATTGGGCACCGACGAACTCCATCCCGTTC 673159
Query 176095 CTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTT 176154
| || || ||| ||||| |||| | |||||| |||| | || | ||| |
Sbjct 673158 CAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCT 673099
Query 176155 CAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAA 176214
| || | | || ||||| | |||||| | |||| | || || || ||||| |
Sbjct 673098 CGATGCTCTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGGGATGGAAGA 673039
Query 176215 TATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGC 176274
|| ||| ||| || | | |||||||| || | ||| || || ||| || |
Sbjct 673038 CGCTACGCGTGATGGATGATACATTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTAC 672979
Query 176275 CTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAAC 176334
| || || || || | ||| ||||| ||| || || | |||| ||| || || |
Sbjct 672978 CACCTTGCAGACGAGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACC 672919
Query 176335 CCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT 176394
| ||| | | ||| |||| |||| |||| ||| || | | | || ||||| || |
Sbjct 672918 CGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGT 672859
Query 176395 AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGT 176454
| | | || ||| ||| ||| | || || |||| ||||| || || | |
Sbjct 672858 ACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACT 672799
Query 176455 TGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCG 176514
||||||| || ||||| | ||| || || || || | ||||| | ||| |
Sbjct 672798 TGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAG 672739
Query 176515 ACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAAT 176574
| || || || ||| | ||| | || || ||||| | || ||||| || ||||
Sbjct 672738 AGGGGATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATAAAAT 672679
Query 176575 CCTCCACTGGAATCTTC-GTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGG 176633
|||| | || | |||| | || | |||||||| | |||| || |||| | ||
Sbjct 672678 CCTCGATCGGGA-CTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCTCGG 672620
Query 176634 AGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT 176683
||||| ||| || | ||| ||| ||||||||| | | |||||||
Sbjct 672619 AGCCATTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAAGGCCATGTCAAT 672570
>seq45
Length=1665130
Score = 192 bits (212), Expect = 1e-43
Identities = 275/382 (72%), Gaps = 4/382 (1%)
Strand=Plus/Plus
Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327
|| || || || || || || |||||||| ||||| || |||||||| |||||| | |||
Sbjct 832689 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCATGTTACCGAGGTAAAGG 832748
Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386
|| | ||| | |||||| | | || || | |||| | ||| |||| ||| || ||
Sbjct 832749 CAATCCTGTTGACCGAGCGAGATCTCG-GCGACGGCGCGCGAGATCTTTCTGGTGACAAA 832807
Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446
|| |||||| | ||| |||||||||||||||||| |||||||||||| |||||||
Sbjct 832808 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCGTTGCACGCGTACATGCC 832867
Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506
|| | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| ||
Sbjct 832868 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAGCTTGGCGACTCCGTAGGG 832927
Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566
|| || || | |||||| ||||| |||||| | || ||| ||||| | |
Sbjct 832928 CGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACGACCTTGCCGTACAA 832987
Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625
||| |||||||| ||||||||||| | || || || || ||||| | ||||| |
Sbjct 832988 CTCCGAGGTCGAGGCTTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 833046
Query 268626 CCTCGAGCAAACGAAGAGTTCC 268647
| ||||| | ||| || |||||
Sbjct 833047 CGTCGAGTAGACGGAGTGTTCC 833068
Score = 107 bits (118), Expect = 4e-18
Identities = 121/159 (76%), Gaps = 5/159 (3%)
Strand=Plus/Plus
Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996
|||| |||| ||| ||||| ||||| || || |||||||||||| | |||||||||||
Sbjct 330634 TGAC-CCCGACTTTTGGTAATCCGAAACACGCTTCTCGAAGAAGTTTGTCTTGCCCTCGA 330692
Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054
| || || | | ||||||||| ||||||||||||| | ||| || |||||||| ||
Sbjct 330693 GCGAGATCATGTTCATGAAGTCGAAGGGGTTCTCGGTGTTCCAGAC--CTTGGGGTTGCC 330750
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA 10093
| || || | ||||| || ||||||||||||||
Sbjct 330751 CAAGGCGACCAACAATCGGTCGGCGACGAACTCGATGTA 330789
>seq20
Length=1456699
Score = 178 bits (196), Expect = 2e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || || || || | |||||||| ||||| ||||| || |||||||| || ||||
Sbjct 547237 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 547178
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | ||||| || | |||||| || ||||| ||||| | ||||||||| || ||
Sbjct 547177 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGG 547118
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||||| |||||||| |||||||| ||||||||| ||||| ||||| | || || ||
Sbjct 547117 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAAC 547058
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || | |||||||||||| || |||||
Sbjct 547057 CTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| ||||| ||||| || || ||||| ||||| | |
Sbjct 789615 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789556
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| || |||
Sbjct 789555 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789496
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||||||||| | |||||| ||||| ||||| | || || ||
Sbjct 789495 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 789436
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||| || ||||||||||| || |||||
Sbjct 789435 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||||||| ||||| ||||| || || ||||| ||||| | |
Sbjct 789159 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789100
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||| | ||||||||| || |||
Sbjct 789099 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789040
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| | |||||| || || ||||| | || || ||
Sbjct 789039 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 788980
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || || | |||||||||||| || |||||
Sbjct 788979 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| ||||| || || ||||| ||||| | |
Sbjct 789387 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789328
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || ||||| | ||||||||| || |||
Sbjct 789327 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789268
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| | |||||| || || ||||| | || || ||
Sbjct 789267 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 789208
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||| || ||||||||||| || |||||
Sbjct 789207 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161
>seq55
Length=539833
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || || ||||| ||||||||||| || ||||
Sbjct 107531 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 107472
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| |||||||| ||||| | ||| ||||| || ||
Sbjct 107471 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 107412
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 107411 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 107352
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | |||||| || || ||||| || ||||||||||| || |||
Sbjct 107351 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 107307
>seq51
Length=651083
Score = 93.3 bits (102), Expect = 8e-14
Identities = 130/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||||||||||||||| | | ||| | || ||||| | ||| || ||||||||
Sbjct 365016 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGCTCCTCGATGTGGTGGAAC 365075
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| || ||||| |||||||| | |||| |||||| |||||| || | || |||
Sbjct 365076 GCGTGTTGGGCGACGTACGCGACACGCAAGTTGGGGTGCTTCTCGACCTTG-CCTTCGTC 365134
Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156
|| | |||||| || | || |||||| || || | || || ||||| ||||||||
Sbjct 365135 GGGCACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCC 365194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621570539840
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