Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq41 381 1e-100 seq45 120 6e-22 >seq41 Length=447122 Score = 381 bits (422), Expect = 1e-100 Identities = 852/1265 (67%), Gaps = 32/1265 (3%) Strand=Plus/Plus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| | Sbjct 423110 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 423169 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || || ||| | |||||| ||||||| || || ||||| ||||||||| Sbjct 423170 GAATCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 423229 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||||||| | || ||| ||||| || ||||| ||||| Sbjct 423230 ATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 423289 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | ||| | |||| | || | |||||| ||| || | || ||||||| Sbjct 423290 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 423349 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 ||| || | | || || ||| ||| ||| || | ||| |||| Sbjct 423350 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 423391 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 | |||||||||||| ||| || | | ||||| || ||||||||||| | ||| Sbjct 423392 AAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTC 423451 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 ||||||| ||||| |||| || || || || || ||| ||||||||||||| Sbjct 423452 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAG 423511 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869 |||||||| || ||||| |||| |||||| | || | ||| || ||| || | Sbjct 423512 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGC-GTACCAAAGCTTTTG 423570 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 || || |||| | || |||||| ||||| | ||| ||| ||| Sbjct 423571 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAA 423630 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| ||| |||| |||| ||||||||| || ||||| | ||| |||||| Sbjct 423631 CTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTC 423690 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 || | || ||| ||| | || ||| || || ||||| |||||||| || |||||| || Sbjct 423691 GCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATC 423750 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | | | ||| ||| ||| |||||| | || |||| || || |||||||| Sbjct 423751 ACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTC 423810 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||| Sbjct 423811 AGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 423870 Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || | | || |||| ||| || || | || || |||||||| |||| ||| Sbjct 423871 GACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 423930 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||| ||||| |||||| | ||| | | | || |||| |||| || || | || Sbjct 423931 GTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACC 423990 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 423991 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGA 424050 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| ||||||| ||| ||| || || || || ||||| || | || | | | ||| Sbjct 424051 GTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 424110 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468 ||| || || || ||||||||||||||||| |||| || | || ||||| ||| | Sbjct 424111 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTACGACTGCA 424169 Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526 ||| ||| ||||||| || |||||||| | |||| | |||||| |||| || Sbjct 424170 --AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTG 424227 Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 |||||| ||| | | || | ||| | |||| ||||||||||||||||||||| Sbjct 424228 CGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 424284 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643 ||| |||||||| |||||| || ||| || || | ||||| || ||| | || Sbjct 424285 GAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 424344 Query 245644 GGCGT 245648 ||||| Sbjct 424345 GGCGT 424349 >seq45 Length=1665130 Score = 120 bits (132), Expect = 6e-22 Identities = 188/263 (71%), Gaps = 11/263 (4%) Strand=Plus/Minus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | || || |||||||||||||||||| || | | |||||||||| | |||||| Sbjct 331125 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 331066 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| ||||| | |||||||| || || | |||||||| |||||| ||||| Sbjct 331065 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTTCACACCGACTTTGCTTGCCTCTTGTTC 331006 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| |||| || ||| | |||||| | ||| || Sbjct 331005 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATTAAGGAAGC 330950 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCAT 42979 ||| |||||||||||||| ||| | || || | || || || || || ||||||| Sbjct 330949 CGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCTTCCTTGCG-GT--TTGATCGGCAT 330893 Query 42980 GAACCACGACCTCATGTGCAAGT 43002 ||| | | ||||||||| ||| Sbjct 330892 GAATGCCAAGCTCATGTGCCAGT 330870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338350094720