Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq41 381 1e-100
seq45 120 6e-22
>seq41
Length=447122
Score = 381 bits (422), Expect = 1e-100
Identities = 852/1265 (67%), Gaps = 32/1265 (3%)
Strand=Plus/Plus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 423110 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 423169
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| | |||||| ||||||| || || ||||| |||||||||
Sbjct 423170 GAATCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 423229
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| | || ||| ||||| || ||||| |||||
Sbjct 423230 ATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 423289
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| || | || |||||||
Sbjct 423290 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 423349
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 423350 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 423391
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| || | | ||||| || ||||||||||| | |||
Sbjct 423392 AAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTC 423451
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 423452 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAG 423511
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
|||||||| || ||||| |||| |||||| | || | ||| || ||| || |
Sbjct 423512 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGC-GTACCAAAGCTTTTG 423570
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| ||||| | ||| ||| |||
Sbjct 423571 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAA 423630
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| |||| |||| ||||||||| || ||||| | ||| ||||||
Sbjct 423631 CTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTC 423690
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|| | || ||| ||| | || ||| || || ||||| |||||||| || |||||| ||
Sbjct 423691 GCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATC 423750
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | ||| ||| ||| |||||| | || |||| || || ||||||||
Sbjct 423751 ACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTC 423810
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 423811 AGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 423870
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | || |||| ||| || || | || || |||||||| |||| |||
Sbjct 423871 GACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 423930
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| ||||| |||||| | ||| | | | || |||| |||| || || | ||
Sbjct 423931 GTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACC 423990
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 423991 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGA 424050
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
||| ||||||| ||| ||| || || || || ||||| || | || | | | |||
Sbjct 424051 GTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 424110
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468
||| || || || ||||||||||||||||| |||| || | || ||||| ||| |
Sbjct 424111 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTACGACTGCA 424169
Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526
||| ||| ||||||| || |||||||| | |||| | |||||| |||| ||
Sbjct 424170 --AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTG 424227
Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583
|||||| ||| | | || | ||| | |||| |||||||||||||||||||||
Sbjct 424228 CGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 424284
Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643
||| |||||||| |||||| || ||| || || | ||||| || ||| | ||
Sbjct 424285 GAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 424344
Query 245644 GGCGT 245648
|||||
Sbjct 424345 GGCGT 424349
>seq45
Length=1665130
Score = 120 bits (132), Expect = 6e-22
Identities = 188/263 (71%), Gaps = 11/263 (4%)
Strand=Plus/Minus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | || || |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 331125 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 331066
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| ||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 331065 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTTCACACCGACTTTGCTTGCCTCTTGTTC 331006
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||| | ||| ||
Sbjct 331005 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATTAAGGAAGC 330950
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCAT 42979
||| |||||||||||||| ||| | || || | || || || || || |||||||
Sbjct 330949 CGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCTTCCTTGCG-GT--TTGATCGGCAT 330893
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | | ||||||||| |||
Sbjct 330892 GAATGCCAAGCTCATGTGCCAGT 330870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338350094720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |