Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq20 123 6e-23
seq55 118 3e-21
seq36 113 1e-19
seq34 107 5e-18
>seq20
Length=1456699
Score = 123 bits (136), Expect = 6e-23
Identities = 168/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | || || | || | ||| || || ||||| || ||||||
Sbjct 547239 TGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 547180
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|||||||| || || || || | || || || |||||||| ||||| ||||| |||
Sbjct 547179 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGG---TCT 547123
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || ||||| || || || || ||||| || || | || ||
Sbjct 547122 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGAC 547063
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||||||||||||||| || |||| ||||||||||| || |||||
Sbjct 547062 TCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || || ||||||
Sbjct 547008 CCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 546949
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| || || || || | || || || |||||||| ||||| ||||| ||||||
Sbjct 546948 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGG---TCTGGG 546892
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || |||||||| || || || || ||||| || || | || || ||
Sbjct 546891 GGAATGCCCTCCTTATCCTGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCA 546832
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||||||||||||| ||||| | |||||||| || || |||||
Sbjct 546831 ACCTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || | || | ||| || || || || || || || |||
Sbjct 789159 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789100
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | || || || || ||||| ||||| ||||| ||||||
Sbjct 789099 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGG---TCTGGG 789043
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || ||||| || | || || || || || | || || ||
Sbjct 789042 GGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCG 788983
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| ||||||| ||||||||||| || |||||
Sbjct 788982 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933
Score = 96.9 bits (106), Expect = 8e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || || || || || || |||
Sbjct 789387 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789328
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | || || || || ||||| ||||| ||||| ||||||
Sbjct 789327 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGG---TCTGGG 789271
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || ||||| || | || || || || || | || || ||
Sbjct 789270 GGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCG 789211
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| || || || ||||||||||| || |||||
Sbjct 789210 ACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161
Score = 96.9 bits (106), Expect = 8e-15
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| ||||| | || || | || | ||| || || || || || || ||
Sbjct 789618 TGACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCC 789559
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||||||||| || || || | || || || |||||||||| ||||| || |||
Sbjct 789558 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCT 789502
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || ||||| || || || || || | || || || || || | || ||
Sbjct 789501 GGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGAC 789442
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||||||||| || || || ||||||||||| || |||||
Sbjct 789441 TCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
>seq55
Length=539833
Score = 118 bits (130), Expect = 3e-21
Identities = 142/192 (74%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || |||||||| | ||||| || || || | || || || ||||||
Sbjct 107495 TCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 107436
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| || || |||||| || ||||| || || ||||| || | || |||
Sbjct 107435 ATGAGACGTTGCTGG---TCTGGGGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACG 107379
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||| || || ||||| ||||||||||| || || |||||||||
Sbjct 107378 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 107319
Query 288460 ACGAATATCTGC 288471
||||| || |||
Sbjct 107318 ACGAAGATTTGC 107307
>seq36
Length=1841281
Score = 113 bits (124), Expect = 1e-19
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || || ||||||||||| || || || | || || || || |||
Sbjct 1559724 TCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 1559783
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| ||||| || || ||||| ||||| || |||||||| || | || |||||
Sbjct 1559784 ATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTG 1559843
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||| || || ||||| ||||| ||||| || || || |||||||||
Sbjct 1559844 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1559903
Query 288463 AATATCTGCA 288472
|| || ||||
Sbjct 1559904 AAGATTTGCA 1559913
>seq34
Length=727289
Score = 107 bits (118), Expect = 5e-18
Identities = 252/373 (68%), Gaps = 12/373 (3%)
Strand=Plus/Plus
Query 72412 TTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAA 72471
||| |||||| || | || |||||||| || || || |||| ||||| | || |
Sbjct 66190 TTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCCGAGA 66249
Query 72472 ATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCT 72531
|| || || || ||||| |||||||| || || ||||||||||| | ||||||
Sbjct 66250 CGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCG 66309
Query 72532 GTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACG 72591
|| || ||||| |||||||| ||||||| | |||||| || | ||||| |||
Sbjct 66310 TCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAACCAC- 66368
Query 72592 AGAGTCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAA--TCACGAAGGTGGTCGCG 72647
||||||| | | || | || || || | || | || ||| | |||||
Sbjct 66369 -GAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATTTCCCGA--GCTGTCGCC 66425
Query 72648 AATATTTTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAG 72705
| | | || | | ||| | | | ||| | || ||||| || || || ||||| | |
Sbjct 66426 GAGA-TCTCGCTCG-GTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 66483
Query 72706 ATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTC 72765
|||||||| | ||| || ||||| || | |||||| |||||||||| ||||| || |
Sbjct 66484 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 66543
Query 72766 CGGATGACTATGT 72778
| || |||| |||
Sbjct 66544 CCGACGACTTTGT 66556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653311768816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |