Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq41 178 2e-39 seq36 104 3e-17 seq45 93.3 5e-14 >seq41 Length=447122 Score = 178 bits (196), Expect = 2e-39 Identities = 562/860 (65%), Gaps = 12/860 (1%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | |||||| | | |||||| || || || Sbjct 423380 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 423439 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 423440 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 423499 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | || || || |||| | ||||| || | | Sbjct 423500 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 423559 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 423560 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 423618 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| |||||||| || | | || ||| || || || | | | |||||||| Sbjct 423619 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 423678 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | | | |||| ||||||| ||| || || || || |||||||| || Sbjct 423679 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 423738 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| ||| | || || | || || || || | |||| || Sbjct 423739 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 423798 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || |||||||| || || ||||| | ||||| | || ||| Sbjct 423799 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 423858 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | ||| || Sbjct 423859 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 423918 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || || ||| || ||| | | || | || | |||||| Sbjct 423919 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 423976 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | |||| || ||||| Sbjct 423977 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 424036 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || ||||||||||| |||| | | || ||||| || ||| | || || Sbjct 424037 ATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGA 424096 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 424097 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 424156 Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||| | || ||||||| || | ||||| | ||||| || |||| | ||| ||||| Sbjct 424157 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 424215 Query 115303 AAACATGTATTG-GGGTGTT 115321 | ||||| ||| ||| ||| Sbjct 424216 GAGCATGTGTTGCGGGCGTT 424235 >seq36 Length=1841281 Score = 104 bits (114), Expect = 3e-17 Identities = 334/506 (66%), Gaps = 23/506 (5%) Strand=Plus/Minus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||| Sbjct 672373 CCCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGTTTGAG 672315 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | ||| || | |||| | || | || | ||| |||||||| ||||| || ||||| Sbjct 672314 CAAGGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 672255 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || |||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 672254 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 672195 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || | |||||||||| ||||| | ||||| ||| | | || Sbjct 672194 GACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGC-TTGAA-TCTCGACATTATC- 672138 Query 172762 GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACAC 172818 ||| | || | | || || || || || |||| || || | |||||| || Sbjct 672137 GAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGAC 672078 Query 172819 ACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATC 172878 ||| |||| || ||||| || || | ||||| | || ||||| | ||| |||||||| Sbjct 672077 ACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTGGCGGAATC 672018 Query 172879 ACCCTCCGTCACGATGAGCGTACACTTTCCAGATT-GTGCC--GTCCCCGCCTTGTTCGC 172935 || || |||| ||||||||| ||||| ||| || || || || || ||||| || Sbjct 672017 TCCTTCGGTCAAGATGAGCGTGCACTTG---GATCCGTTCCTCGTTCCAGCGTTGTTTGC 671961 Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992 ||| || | |||| | ||| || || || |||| | || || |||||||| Sbjct 671960 ATCCTCGAGCTTGACGAGACCCGTGATACGCGATCGCTTGTGT---CCGTCCGTCTTCTT 671904 Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018 ||| || || ||||||||||| Sbjct 671903 GAGCATCTGGTCCTGCTTGAACTTGG 671878 >seq45 Length=1665130 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| || |||||||| ||| || || || || ||||||| ||| | Sbjct 833008 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 832949 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 832948 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 832889 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || || | | |||||| |||||| ||||||||||||||| Sbjct 832888 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 832829 Query 8706 TCACCCCGTCGTGGCC 8721 || ||||| ||||||| Sbjct 832828 TCCCCCCGCCGTGGCC 832813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353062381760