Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq41 170 2e-37
seq45 84.2 3e-11
seq33 82.4 9e-11
>seq41
Length=447122
Score = 170 bits (188), Expect = 2e-37
Identities = 562/863 (65%), Gaps = 18/863 (2%)
Strand=Plus/Plus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| || || || | | |||||| | | |||||| || || ||
Sbjct 423380 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 423439
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| ||||| || || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 423440 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 423499
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| |||||||||||||| | || | || || || |||| | ||||| || | |
Sbjct 423500 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 423559
Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 423560 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 423618
Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728
| ||| |||||||| || | || || | | || || || || | | | || ||||
Sbjct 423619 CAAGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGA 423677
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
|||| | ||| | | | |||| || |||| ||| || || || || ||||||||||
Sbjct 423678 AGAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCG 423737
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| |||||||||| ||| ||| | || || | || || || || | |||| |
Sbjct 423738 CAAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 423797
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-- 116906
| || | || || |||||||| || || ||||| | ||||| | || | ||||
Sbjct 423798 ACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 423854
Query 116907 ----ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962
||| | |||| || || | ||| || ||| | || || ||||| || | ||
Sbjct 423855 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 423914
Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020
| || | || | ||| || || || ||| || ||| | | | || | || | |||
Sbjct 423915 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTG 423972
Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080
|||| || ||| ||||| || || ||| ||||| | |||||| | |||| || |
Sbjct 423973 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTC 424032
Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140
|||||| || ||||||||||| |||| | | || ||||| || ||| | || ||
Sbjct 424033 GTAGATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGG 424092
Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200
|| || || ||||||||||| || || | |||||| | || | | ||||||
Sbjct 424093 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 424152
Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260
| ||| | || |||||| ||||| | ||||| || |||| | ||| ||
Sbjct 424153 GAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCG 424212
Query 117261 CATAAACATGTATTG-GGGTGTT 117282
||| | ||||| ||| ||| |||
Sbjct 424213 CATGAGCATGTGTTGCGGGCGTT 424235
>seq45
Length=1665130
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500
|| ||||| || |||||||| ||| || || || || |||| || ||| |
Sbjct 833008 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 832949
Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 832948 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 832889
Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620
||||| || ||||| || || || | | | |||| |||||| |||||||||||||||
Sbjct 832888 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 832829
Query 10621 TCACCCCGTCGTGGCC 10636
|| ||||| |||||||
Sbjct 832828 TCCCCCCGCCGTGGCC 832813
>seq33
Length=2733711
Score = 82.4 bits (90), Expect = 9e-11
Identities = 164/240 (68%), Gaps = 10/240 (4%)
Strand=Plus/Plus
Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACG----GTTGATTTTCACGGG 12927
||| |||| ||||||||||||||| ||||| | ||| |||| ||| | || |||
Sbjct 1800590 CTTGCCGATGGCGTCAATTTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCGGT 1800649
Query 12928 CAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 12987
| | || | || ||||||| || ||||||||| || |||||||| ||||| |
Sbjct 1800650 C----GCGAACAAGTCGCGCACTCGAGAGGGACCGACACCGACGAACATCTCGACAAACT 1800705
Query 12988 TGGCGGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046
|| | || ||| | ||||| ||| || ||||| ||| | || ||||||
Sbjct 1800706 CGGATCCCGAGACA-GACAAAAAGGGCACGCCGGCCTCACCGGCGGTCGCCTTGGCGAGC 1800764
Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106
| |||||| ||||| || || || | || | ||||| || |||||| ||||||||
Sbjct 1800765 AAGGTCTTACCCGTTCCCGGAGGACCAGAAAGCATCGCACCGCGAGGGATCTTGGCACCA 1800824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506647843520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |