Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq41 102 1e-16
>seq41
Length=447122
Score = 102 bits (112), Expect = 1e-16
Identities = 163/226 (72%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| || ||||||| || || ||||| ||| || | | || ||||||||||
Sbjct 422254 CTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 422312
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTT-TGCTCACGTTG 203956
| ||||| || || || ||| ||||| | |||||| || | || | ||| ||| |
Sbjct 422313 CCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGTGCCATCGTCG 422372
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
|| ||| | | ||| ||||| || || || ||||||||| |||||||| ||||| ||
Sbjct 422373 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCGCCTCGATCGGC 422430
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| || || |||||| ||||| ||||| | |||||| || ||||||
Sbjct 422431 CGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 422476
Score = 96.9 bits (106), Expect = 6e-15
Identities = 344/529 (65%), Gaps = 14/529 (3%)
Strand=Plus/Plus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||||||||| ||| ||||| || | | || |||||||| || | | | ||
Sbjct 423709 CTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACCTCCTC 423768
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283
| || ||||||| | |||||| || || | | ||| |||||||| ||||| |
Sbjct 423769 CTTGCCGTGGTTCTTGCGAAGGTCCAG-GAACTCGAAGACGTCAGCGTGCCATGGCTCGA 423827
Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 423828 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 423887
Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403
|||| | || || ||||| || || | ||||| | | |||||||||| | ||||
Sbjct 423888 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGT 423947
Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463
||||| || | | |||| |||| | || || || || | ||||| ||
Sbjct 423948 AAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 424007
Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522
| | |||||| ||||| || ||| |||||||||| |||| || |||||| || ||
Sbjct 424008 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTTCATGGTG 424066
Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
||||| | ||||| | |||| || || || || |||| ||||||||| ||
Sbjct 424067 ACCAGGAAACACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 424125
Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637
||||||| | ||| | ||||| ||| |||| | || || |||| ||| |
Sbjct 424126 GGCGTGGGTAAAG----TAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTCGA 424181
Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686
||| ||||| || || | ||||| | ||||| | |||||| ||
Sbjct 424182 TGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGG 424230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154484360320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |