Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq41 102 1e-16 >seq41 Length=447122 Score = 102 bits (112), Expect = 1e-16 Identities = 163/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || ||||||| || || ||||| ||| || | | || |||||||||| Sbjct 422254 CTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 422312 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTT-TGCTCACGTTG 203956 | ||||| || || || ||| ||||| | |||||| || | || | ||| ||| | Sbjct 422313 CCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGTGCCATCGTCG 422372 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || ||| | | ||| ||||| || || || ||||||||| |||||||| ||||| || Sbjct 422373 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCGCCTCGATCGGC 422430 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || || |||||| ||||| ||||| | |||||| || |||||| Sbjct 422431 CGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 422476 Score = 96.9 bits (106), Expect = 6e-15 Identities = 344/529 (65%), Gaps = 14/529 (3%) Strand=Plus/Plus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||||||||| ||| ||||| || | | || |||||||| || | | | || Sbjct 423709 CTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACCTCCTC 423768 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | ||| |||||||| ||||| | Sbjct 423769 CTTGCCGTGGTTCTTGCGAAGGTCCAG-GAACTCGAAGACGTCAGCGTGCCATGGCTCGA 423827 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 423828 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 423887 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | |||||||||| | |||| Sbjct 423888 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGT 423947 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 423948 AAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 424007 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| |||| || |||||| || || Sbjct 424008 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTTCATGGTG 424066 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | ||||| | |||| || || || || |||| ||||||||| || Sbjct 424067 ACCAGGAAACACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 424125 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637 ||||||| | ||| | ||||| ||| |||| | || || |||| ||| | Sbjct 424126 GGCGTGGGTAAAG----TAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTCGA 424181 Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 ||| ||||| || || | ||||| | ||||| | |||||| || Sbjct 424182 TGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGG 424230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154484360320