Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq36 136 4e-27
seq55 131 2e-25
seq20 120 3e-22
>seq36
Length=1841281
Score = 136 bits (150), Expect = 4e-27
Identities = 147/192 (77%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| || | || ||||| | || ||||||||||||||||| ||
Sbjct 1559723 CTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 1559782
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||||| || | || ||||||||| |||||| |||||| |||
Sbjct 1559783 GATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTTGA-CGT 1559841
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | |||||||| |||||||| || || || |
Sbjct 1559842 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 1559901
Query 46581 CAAAGATTTGCA 46592
| ||||||||||
Sbjct 1559902 CGAAGATTTGCA 1559913
>seq55
Length=539833
Score = 131 bits (144), Expect = 2e-25
Identities = 145/191 (76%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||||| | ||||| | || ||||||||||||||||||||
Sbjct 107496 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 107437
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | || | || |||||||| |||||| |||||| |||
Sbjct 107436 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 107378
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | ||||| || |||||||| || || || |
Sbjct 107377 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 107318
Query 46581 CAAAGATTTGC 46591
| |||||||||
Sbjct 107317 CGAAGATTTGC 107307
>seq20
Length=1456699
Score = 120 bits (132), Expect = 3e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| || || | | ||||| ||||| || | || |||||| || || |||||
Sbjct 789622 TTATTGACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTA 789563
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|| | || ||||| | || |||||||||||||| ||||| ||||| |||||||||||
Sbjct 789562 ATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTC 789503
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| || | || |||||||| ||||| |||||| | | | |||||| ||
Sbjct 789502 TGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGA 789443
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | ||||| || |||||||| ||||| || || |||||||||||
Sbjct 789442 CTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | ||| | ||||| |||| || |||||| ||||| ||||||||||
Sbjct 547236 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 547177
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || |||||||||||||| ||||| || | || || ||||| | ||
Sbjct 547176 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 547117
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545
| || |||||||||| ||||| ||||| ||| | | | |||||| || || ||
Sbjct 547116 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCAAC 547058
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| |||| || || || |||||||||||
Sbjct 547057 CTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| |||| || |||||| ||||| ||||| |||| || || || | || ||
Sbjct 546991 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCCTC 546932
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||| ||||| || | || || ||||| | || | || |||||| |||
Sbjct 546931 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 546872
Query 46504 GATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
||||| ||| | ||| | | | |||||| || || || || | |||||| || |
Sbjct 546871 AATCTTAGCCTTTA-CGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCT 546813
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || | || || ||||||||||||||
Sbjct 546812 TGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| || | || ||||| | || |||||||||||||| || ||
Sbjct 789352 CTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 789293
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || || ||||| | || | | ||||||||| |||||| |||||| |
Sbjct 789292 GATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATT 789233
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || || | ||||| || |||||||| ||||| || ||
Sbjct 789232 GTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGAC 789173
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 789172 GAAGATTTGCAT 789161
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| || | || ||||| | || |||||||||||||| || ||
Sbjct 789124 CTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 789065
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || || ||||| | || | | ||||||||| |||||| |||||| |
Sbjct 789064 GATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATT 789005
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || || | |||||||| ||||| |||| || || ||
Sbjct 789004 GTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 788945
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 788944 GAAGATTTGCAT 788933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237891285440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |