Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq54 340 2e-88 seq33 170 2e-37 seq45 141 1e-28 seq39 105 8e-18 seq34 95.1 2e-14 >seq54 Length=1443984 Score = 340 bits (376), Expect = 2e-88 Identities = 651/959 (68%), Gaps = 3/959 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | |||||| || ||||| | || ||||| || || |||||||||||||| Sbjct 1396858 TCACCGGTGAGGATGGCAGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1396799 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||| | || | ||||| | | || || | || ||| Sbjct 1396798 ATGGACTTGTTAGGCTCCTTGCCGCTGAAGAAGTCCGAGACGAGTTTCTGGACCTTGGGG 1396739 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || | || |||||||| ||| Sbjct 1396738 ATACGAGTGGACCCACCGACGAGGACGATCTCGTGGACAGAGGCCTTGTCGATCTTGGAG 1396679 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 1396678 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 1396619 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || ||||| || || || ||||| || | || ||| | | ||| || || Sbjct 1396618 TCGAAGCGGGCGCGGGTGATAGAGGTGTAGAAGTCGATACCCTCGAAAAGCGAGTCGATC 1396559 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 1396558 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGG 1396499 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 1396498 AGACGACGGAGAGCACGGGCGTTCGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 1396439 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 1396438 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 1396379 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 1396378 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGACACATCGAACGTT 1396319 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 1396318 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTCTTGTCGAGGCCG 1396259 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || || || ||||| || ||| || || | || Sbjct 1396258 TAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTTAGACCCGAGATG 1396199 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 1396198 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 1396139 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || || | || ||||| ||| || Sbjct 1396138 ACAGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCAGTCTCCTTCATCTTGAGCAGG 1396079 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | ||||| || || || || | || || || Sbjct 1396078 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTCG 1396019 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || ||||| || | | | || |||||| | | ||| | ||||| ||| Sbjct 1396018 ATGATGGGCTT---GGTTCCCTTGTCGACAACCTTGAAGGGCCAGTGCTTCATGTCGGAC 1395962 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || || ||||| ||||| || || ||||| Sbjct 1395961 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 1395903 >seq33 Length=2733711 Score = 170 bits (188), Expect = 2e-37 Identities = 526/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 959961 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 959902 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | ||| || || ||||| Sbjct 959901 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAGACGAGCGATTGGATCTTGGGGAT 959842 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 959841 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 959782 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 959781 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 959723 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||| | || || | |||| || || | | | | ||| || | | Sbjct 959722 CGAAGCGGGCACGCGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 959663 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 959662 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 959603 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 959602 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 959543 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | || || || |||||||||||||| || || || Sbjct 959542 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 959485 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 959484 GGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 959425 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 959424 TCCTCCTCCGAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 959365 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | |||||||||| ||||| || || || || || || || || ||||| || || || Sbjct 959364 ACCGAGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 959305 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 959304 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 959245 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 959244 GACGGTAACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 959185 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| || ||||| || || ||||| Sbjct 959184 CTTGGAGAGGACCATGGACGAGATCTC 959158 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 958904 CTTGGCCGAGTCGCCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 958848 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 958847 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 958788 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 958787 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 958755 >seq45 Length=1665130 Score = 141 bits (156), Expect = 1e-28 Identities = 228/327 (70%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || || ||||||| ||| Sbjct 601300 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAATACCTCAAAGACACCG 601241 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 601240 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCCCCCCCGAGATCGTAGACGATGATG 601181 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 601180 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 601124 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| ||| || || || || || || | || || || |||||||||||| Sbjct 601123 TTAACGACACGGAGAACATTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 601064 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 601063 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 601004 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 601003 TAGGCCTCGGCGGTCTCCTTCATCTTG 600977 >seq39 Length=1650036 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||| ||||||| ||||| || || || || || || | ||| || || || Sbjct 252205 TCGAGACCATACGCGAGGGCCGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 252146 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || || | || || || ||||||||||| ||||| ||||| |||||||| || Sbjct 252145 CCAGCGATCGTACCGGCGTCCTTGGTCGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGA 252086 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 252085 ACGGTGACGACGGCGTGCTTGACCGACTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 252026 Query 7781 TTG 7783 ||| Sbjct 252025 TTG 252023 >seq34 Length=727289 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 ||||| || || || || || ||| | ||||| || || ||||| || ||| || Sbjct 66189 TTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCCGAG 66248 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | ||||| || ||||| ||||| || || || || || || ||| | | ||| | Sbjct 66249 ACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 66308 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| || || |||||||||| Sbjct 66309 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAACCA 66367 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | ||| || || | || || | | | |||||| | Sbjct 66368 CGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATTTCCCGAGCTGTCGCCGA 66427 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || ||||| Sbjct 66428 GATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTGATTG 66487 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||| ||||| | ||||||||| || | || ||||| | || || Sbjct 66488 GGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 66547 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 66548 CGACTTTGT 66556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132228380480