Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq36 82.4 9e-11 >seq36 Length=1841281 Score = 82.4 bits (90), Expect = 9e-11 Identities = 238/359 (66%), Gaps = 12/359 (3%) Strand=Plus/Minus Query 168241 TTGAGAATGAGACCCTTGATATGGCTTCCATCATTATCTGCGTCTGTCATGATCATGAGA 168300 |||| || ||||||||||| || |||||| | ||| || | |||||||||||| Sbjct 672286 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 672227 Query 168301 CGACCATAACGAAGTTCGGAAACATCTTTGTACTCCTTTCCTTGTTGAAGTCCCAAAATT 168360 || ||||| || | || || |||| | || || || || | ||||| || Sbjct 672226 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATC 672167 Query 168361 TTCTTGAGATCATTGAA-CTCCTGATTA--GATGTCAACTGTGCCACCGATGAGTCCCTC 168417 | ||||| | ||||| ||| |||| || | || ||| ||| | || | | Sbjct 672166 TGCTTGATCGC-TTGAATCTCGACATTATCGAGGAGGGCTTTGC--CCGCCGCTTCACGC 672110 Query 168418 ACGTTTTTACACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAG 168477 ||||| |||| || || | || || || ||||| | |||| ||| ||||||| Sbjct 672109 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACGGCC 672050 Query 168478 AGACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTT 168537 ||||| | || ||||| | || || ||||| || || |||| |||||| || ||||| Sbjct 672049 AGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTT- 671991 Query 168538 CCAGA-CTGTGC--CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGAT 168593 || | || | ||| ||||| ||||| ||||| || | ||| || ||| ||||| Sbjct 671990 --GGATCCGTTCCTCGTTCCAGCGTTGTTTGCATCCTCGAGCTTGACGAGACCCGTGAT 671934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975469921600