Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq41 242 7e-59 seq36 96.9 6e-15 seq45 95.1 2e-14 >seq41 Length=447122 Score = 242 bits (268), Expect = 7e-59 Identities = 791/1216 (65%), Gaps = 41/1216 (3%) Strand=Plus/Plus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| |||||| ||||||||| |||| |||||||| ||| Sbjct 423116 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCGGGTGAA 423172 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| ||||| || | | |||| | ||||||| || || || |||||||| ||||| Sbjct 423173 TCGAACGGCATCGCCAACGCCATGAACG-CGTCGGCGAGACCTTGCACTCCGATGCCGAT 423231 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 ||| | ||| | |||||| ||| || |||||||| ||||||||||||| Sbjct 423232 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 423291 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | ||| | ||| | || || ||| || || |||||| || |||| || || Sbjct 423292 GATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC------TTAAA 423345 Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718 | || ||||| || || | | || | || ||| | || ||||| Sbjct 423346 GTCGTACACGCCG--TTCTTGATGAAGCTCGGC-AACGCG--------ATCG-AGGCCAA 423393 Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778 ||| || ||||| ||| || | |||| |||||||| || || | ||| Sbjct 423394 GTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGA 423453 Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838 ||||||| || || |||| || || || || || || || |||||||||||||| Sbjct 423454 CGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAGAG 423513 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 ||| || || ||| || || | ||| || | |||||| || ||| || | | || Sbjct 423514 CATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGC 423573 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC--- 221955 | | |||| ||||| | ||||| |||||| || | | || || | | Sbjct 423574 GGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTA---TTTCTCGAACAAGGCGCG 423627 Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015 |||| ||| || || | |||| ||||| || ||||| || | || ||| Sbjct 423628 GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCA 423687 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 | || | | | ||| | || ||| || || || || ||||| ||||| ||||| Sbjct 423688 CTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAG 423747 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | | || ||||||| ||||| ||| || | || |||| ||||| || | Sbjct 423748 ATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGAC 423807 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 |||||||||||| ||||| || |||| || | || ||||| |||||||||||||| || Sbjct 423808 GTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTG 423867 Query 222196 ATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCG 222255 || || | | | |||| ||| || || | || || | ||||| || Sbjct 423868 GTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTA 423927 Query 222256 ACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGA 222314 ||||| ||||| ||||| | ||| || | | ||| ||| | || |||| Sbjct 423928 GCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGA 423986 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 ||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || | Sbjct 423987 TACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGA 424046 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434 | ||||| ||||| | | | | ||| ||||| ||||| | ||| | | | | | || Sbjct 424047 TCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGG 424106 Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494 |||| || ||||| || |||||| |||||||||| | ||||| || | ||||| || Sbjct 424107 CGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACT 424166 Query 222495 CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554 | ||| | |||||| || ||||| || | |||| | |||| ||||| | Sbjct 424167 GCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTT 424226 Query 222555 GGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 | || | || | |||| | | | || |||| ||| || || || ||||| Sbjct 424227 GCGGGCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 424284 Query 222613 GAACCCAAAGTAGTTG 222628 ||| |||||||||||| Sbjct 424285 GAAGCCAAAGTAGTTG 424300 >seq36 Length=1841281 Score = 96.9 bits (106), Expect = 6e-15 Identities = 163/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||| | || ||| || ||| ||||||||||||| ||||| Sbjct 399152 ATCTGGGCCATGTACAAACAAGCCCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGATCTC 399093 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| || Sbjct 399092 GGCAACGACCTCCACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATCG 399035 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || || || ||||| | ||||| |||||| || ||||| Sbjct 399034 CCCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAATGAGAATTTGGTCGAGA 398975 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || ||||||| || ||||| | ||| || || || || ||||| Sbjct 398974 GGTTCTCGAGCGAGGTGCAGTTCGCCGAGGCGAGGTGCTTTTATGGGTTTCAGAT 398920 >seq45 Length=1665130 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567 ||||||||||||||||| || || ||||||||||| ||| |||| || |||| | Sbjct 331813 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAG 331754 Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 || ||||||| | || || | |||| | || || || || ||||| || || | Sbjct 331753 CCC--GACGAGCGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 331696 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | || |||||||| || |||| ||||| | | || || |||| || ||||| | Sbjct 331695 TTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCCGCCGAGGCTCGAT 331636 Query 25688 GTTTCTACGGTTTCCAGAT 25706 | |||||||||||||| || Sbjct 331635 GCTTCTACGGTTTCCAAAT 331617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843964039680