Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq41 152 6e-32
seq34 140 4e-28
seq45 118 1e-21
>seq41
Length=447122
Score = 152 bits (168), Expect = 6e-32
Identities = 549/856 (64%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| || ||||| ||||||| ||||| ||||||||||||| | ||||| || ||
Sbjct 424231 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 424172
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
|||| || | ||| || |||||| | | || | ||||| | || || |||||
Sbjct 424171 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 424112
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || || || |||||| | || || ||||| || ||| ||||| ||
Sbjct 424111 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGA 424052
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 424051 CTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 423992
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || || |||||| | | | || | ||| || || || ||
Sbjct 423991 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAA 423932
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| | || | || || | || ||||| || || | ||| ||| |||||||| ||
Sbjct 423931 CGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 423872
Query 75571 AAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624
| |||| || ||||| | || || ||||| ||||| | || ||||||||
Sbjct 423871 CGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGCA 423815
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|| || || | |||||||| || | || ||||| || | || |||| ||
Sbjct 423814 CGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 423755
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | |||||||| | | || |||||||| || || || ||| |||| || |||| |
Sbjct 423754 TCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGC 423695
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
| | ||| | || ||||| || | | || || || ||| ||| | || ||
Sbjct 423694 CAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGA 423635
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864
||||| ||| | | | || || ||| ||||||| | ||||| ||| | ||
Sbjct 423634 AGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCC 423575
Query 75865 AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923
|| || | | ||||| | || ||||| || | ||| || || || | || | |
Sbjct 423574 CGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCA 423516
Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983
|||| |||||||| || ||||| || ||||||||||| | || || ||||||
Sbjct 423515 TGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGT 423456
Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043
|| || | ||||| || || | |||||| | | |||||| || || ||||
Sbjct 423455 CGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCA 423396
Query 76044 ATTTGGCATCAATCGC 76059
| ||||| || |||||
Sbjct 423395 ACTTGGCCTCGATCGC 423380
>seq34
Length=727289
Score = 140 bits (154), Expect = 4e-28
Identities = 275/407 (68%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| || |||| | | || | ||| ||||| |||||||||| ||| | || || |
Sbjct 66598 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGGGTG 66539
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
||||| || ||||| | |||||| | || || ||||| || || ||||| || |
Sbjct 66538 TCTTGCTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGC 66479
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | ||| ||||| | |||| | || | ||| | || | |||
Sbjct 66478 TTGGCCTCCATGTTGCCGAGGTAAAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 66419
Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798
| | ||||||| | ||||||||| | ||| || | ||| || |||||||||||
Sbjct 66418 GCTCGGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 66359
Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858
| ||| ||| |||||| ||||| | || || || ||||| || ||||||| ||||
Sbjct 66358 AAGATGCCGTTGCAGGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 66299
Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918
||| ||| |||| ||| || || || || ||||||||||||||| ||| | |||
Sbjct 66298 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGTGTCGTCTCGGATTGA 66239
Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| ||||| ||| || || ||| ||| || || |||||||||||
Sbjct 66238 GGGGTTTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 66192
>seq45
Length=1665130
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||||||| | || || | || || ||||||||||||||||| |||
Sbjct 832791 ATCTTTCTGGTGACAAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 832850
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| || || || || ||||| || ||||||| |||| ||| ||
Sbjct 832851 TTGCACGCGTACATGCCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAGC 832910
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 832911 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 832970
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || |||||||||||
Sbjct 832971 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCTTGGTA 833008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569063087360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |