Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq54 360 3e-94 seq36 206 3e-48 seq20 199 5e-46 seq55 187 3e-42 seq45 111 2e-19 >seq54 Length=1443984 Score = 360 bits (398), Expect = 3e-94 Identities = 928/1405 (66%), Gaps = 14/1405 (1%) Strand=Plus/Plus Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535 || || ||||| || || ||||| || ||||| || |||| | ||| | ||||| Sbjct 1395903 AACACCGTCTTCGATGCCAAGCGACTCATTGGCCGAAAGTGGGCCGATCCCGAGGTCCAG 1395962 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATT 195595 ||| || ||| ||||| | | | ||||| || || ||||| || || Sbjct 1395963 TCCGACATGAAGCACTGGCCCTTCAAGGTTGT---CGACAAGGGAACCAAGCCCATCATC 1396019 Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 | || || | | || |||| || || || | ||||| ||||| ||||| ||| | Sbjct 1396020 GAGGTCGAGTACCGAGGCGAGACCAAGCAGTTCACCCCCGAGGAAATCTCGTCCATGATC 1396079 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 || | ||||||||||||||||| || | | | | || | || || | || || Sbjct 1396080 CTGCTCAAGATGAAGGAGACTGCTGAGGCCTACCTCGGCACGACCGTCTCCAACGCTGTC 1396139 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 || ||||| || || ||||||| || || || ||||| || || ||||| || | || Sbjct 1396140 GTCACTGTCCCCGCCTACTTCAACGACTCGCAGCGACAAGCCACCAAGGATGCCGGTGTC 1396199 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 || ||||||||||| || | || ||||| || || || || || || || ||||| Sbjct 1396200 ATCTCGGGTCTAAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCTTAC 1396259 Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || || |||||||| | || || || || || || | ||||| |||||||| || || Sbjct 1396260 GGCCTCGACAAGAAGACGGTCGGCGAGAAGAACGTCCTCATCTTCGATCTCGGAGGAGGA 1396319 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 ||||| ||||| || ||| | | || || | ||||| ||||| || ||||| || || Sbjct 1396320 ACGTTCGATGTGTCCCTTTTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCC 1396379 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT-GTCTGA 196014 ||||| || || | || ||||| || ||||| || || || || || ||| | Sbjct 1396380 GGTGACACCCACTTGGGAGGTGAGGACTTCGACAACCGACTCGTCACCCACTTCGTC-GC 1396438 Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTC-TGGAAATCCTAGGGCTCTTCGTCGGC 196073 |||||| || ||||| ||||| ||| | || | ||| || | ||||| ||||| | Sbjct 1396439 CGAGTTCAAGCGCAAGAACAAGAAGGATCTCTCGTCGAACGCCC-GTGCTCTCCGTCGTC 1396497 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 | | || || || || |||||||| || || || ||||| | || || || | | | Sbjct 1396498 TCCGCACCGCCTGCGAGCGTGCCAAGCGCACCCTTTCTTCGGCCGCCCAGACCACCATCG 1396557 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 |||| || ||| | || || || || |||||||| || |||| ||||| || || || | Sbjct 1396558 AGATCGACTCGCTTTTCGAGGGTATCGACTTCTACACCTCTATCACCCGCGCCCGCTTCG 1396617 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||||| | || ||||| | ||||| || || || | || || || | Sbjct 1396618 AGGAGTTGTGCCAAGACTTGTTCCGTGGCACCATGGACCCCGTCGAGAAGGTCCTCCGCG 1396677 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 || | ||||| || ||| | || | || || ||||| || || || || || |||| Sbjct 1396678 ACTCCAAGATCGACAAGGCCTCTGTCCACGAGATCGTCCTCGTCGGTGGGTCCACTCGTA 1396737 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 | || ||| | || | | | || |||||||| || || ||||| | | Sbjct 1396738 TCCCCAAGGTCCAGAAACTCGTCTCGGACTTCTTCAGCGGCAAGGAGCCTAACAAGTCCA 1396797 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433 ||||||| ||||| || ||||| || ||||| || || |||||||| || ||| | |||| Sbjct 1396798 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCTGTCCAGGCTGCCATCCTCACCGGTG 1396857 Query 196434 TTGACAATA---ATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490 ||| | || ||| || | || | || ||||| || || | || | Sbjct 1396858 ---ACACGTCCGAGAAGACCCAGGACTTGCTCTTGCTCGATGTGGCCCCGCTCTCGACCG 1396914 Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550 || | || || || |||||||||||||| || | ||| | ||||| || | || | Sbjct 1396915 GTATCGAGACCGCCGGTGGTGTTATGACCAAGCTCATTCCCCGCAACACGACCGTCCCTA 1396974 Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610 | |||||| | ||| || || || |||| || ||||| |||||| || || | Sbjct 1396975 CCAAGAAGTCCGAGACCTTCTCGACCTACGCCGACAACCAACCCGGTGTTTTGATCCAGG 1397034 Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670 | || || || || || |||| ||||||| ||| | || || || | ||||| | Sbjct 1397035 TCTACGAGGGTGAGCGTGCCCGCACAAAGGACAACAACCTCCTCGGCAAGTTCGAGCTTT 1397094 Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 | || || || | || ||| | |||||||| ||| | | || |||||| || || | Sbjct 1397095 CCGGCATCCCCCCCGC-CCCCGTGGTGTTCCGCAGGTCGAAGTCACCTTCGACATTGATG 1397153 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 | || || ||||| |||||| | || | |||||| | | ||||| || | ||||| Sbjct 1397154 CCAACGGTATTCTCAACGTCTCCGCCGCCGACAAGACAACCGGCAAGTCCAACAAGATCA 1397213 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 || | || |||||||| || || |||||| || || || |||||||| | || | Sbjct 1397214 CTATCTCGAACGACAAGGGTCGCCTCAGTAAGGACGAGATCGAGCGTATGGTGCGCGAAG 1397273 Query 196851 CGGAAAAGTACAGGGAAGAAGACGA 196875 | || | || | | | ||||| || Sbjct 1397274 CCGAGCAATATAAGCAGGAAGATGA 1397298 >seq36 Length=1841281 Score = 206 bits (228), Expect = 3e-48 Identities = 183/229 (80%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171863 TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAG 171922 |||||||||| || || ||||| || || || || |||||||||||||| |||||||| | Sbjct 1559913 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1559854 Query 171923 ACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGC 171982 |||| ||||| ||| |||| ||||||| || || ||||||||||| || ||||| |||| Sbjct 1559853 ACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGC 1559794 Query 171983 AACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACG 172042 |||| || || ||||| || || ||||| || ||||| || || ||||| ||||||||| Sbjct 1559793 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACA 1559734 Query 172043 TTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | ||||||||||| || || ||| | || || | || || |||||||| Sbjct 1559733 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGC 1559685 >seq20 Length=1456699 Score = 199 bits (220), Expect = 5e-46 Identities = 184/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || || || |||||||||||||| |||| Sbjct 789384 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 789443 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| || |||| ||||||||||||| |||||||||||||| || | Sbjct 789444 CCTCGGACACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAG 789503 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| ||| | || || || || || ||||| || ||||| || || ||||| |||| Sbjct 789504 ACCAGCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 789563 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||| | || || | || || |||||| Sbjct 789564 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 789616 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | || || || || ||||| || ||||||||||| || Sbjct 546782 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 546841 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || |||||||| |||||||| |||||||| || || || Sbjct 546842 GACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAA 546901 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || || || || ||||| || ||||| ||||| ||||| ||||||||| Sbjct 546902 CAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAAC 546961 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||| | || || | || || |||||| Sbjct 546962 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGCCTCCGAGGTGGT 547009 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || || || |||||||||||||| |||| Sbjct 789156 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 789215 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || |||| ||||||| ||||| ||||| || ||||| || | Sbjct 789216 CCTCGGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAG 789275 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| || || ||||| || || ||||| || ||||| || || ||||| |||| Sbjct 789276 ACCAACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 789335 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||| | || || | || || |||||| Sbjct 789336 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGTGGTGGT 789388 Score = 185 bits (204), Expect = 1e-41 Identities = 171/217 (79%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||| | || || || || ||||| ||||||||||||| Sbjct 547005 GTGGTATGCAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGT 547064 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||||||| || ||||| |||||||| || | Sbjct 547065 CCTCGGACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAG 547124 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| || || || || || || ||||| || ||||| ||||| ||||| || | Sbjct 547125 ACCAACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACT 547184 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || |||||||| || || ||| | || || Sbjct 547185 ACAACATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 547221 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||| | || || || || |||||||||||||| ||||| || Sbjct 788933 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 788992 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| ||||||| ||||| ||||| || ||||| || || || Sbjct 788993 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789052 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || ||||| || || ||||| || ||||| || || ||||| ||||||||| Sbjct 789053 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789112 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||||||| || || ||| | || || | || || |||||| Sbjct 789113 ATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGGT 789160 >seq55 Length=539833 Score = 187 bits (206), Expect = 3e-42 Identities = 177/226 (78%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923 ||||||||| || || || ||||| || || || |||||||||||||| |||||||| || Sbjct 107307 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 107366 Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCA 171983 ||| ||||| ||| |||| ||||||| ||||| ||||||||||| || || || ||||| Sbjct 107367 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 107426 Query 171984 ACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGT 172043 ||| || || || || || || ||||| || ||||| || ||| | || || |||||| | Sbjct 107427 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 107486 Query 172044 TCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||||||||| || || ||| | || || | || || |||||| Sbjct 107487 CCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGAGGTGGT 107532 >seq45 Length=1665130 Score = 111 bits (122), Expect = 2e-19 Identities = 240/355 (68%), Gaps = 3/355 (1%) Strand=Plus/Plus Query 195633 CCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGG 195692 |||| || || ||| | ||| | ||| |||||||||||||| || || | | | ||| Sbjct 600949 CCGAGGAGATCTCGGCCATGATCTTGGGCAAGATGAAGGAGACCGCCGAGGCCTACTTGG 601008 Query 195693 GTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGAC 195752 | || | || | | || || || || || || || ||||||| || | ||||||| Sbjct 601009 GCAAGAAGGTCACCCACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACGCTCAACGAC 601068 Query 195753 AGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAAC 195812 | ||||| |||||||| | | || || ||||| || ||| | | | || || | Sbjct 601069 AAGCGACCAAGGACGCCGGCACGATCGCCGGTCTCAATGTTCTCCGTGTCGTTAACGAGC 601128 Query 195813 CAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTAT 195872 | || || || || || || || ||||| ||||||| | | || || || || || Sbjct 601129 CCACCGCCGCCGCGATCGCCTACGGTCTCGACAAGACCGGTGGCG-AGCGCAACAT-CAT 601186 Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932 | ||| |||||||| || || ||||| |||||||| || ||| || || | ||| Sbjct 601187 CG-TCTACGATCTCGGGGGGGGAACGTTCGATGTCTCGCTCCTCTCGATCGAGGACGGTG 601245 Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || ||| ||| || || ||||| || || | |||||||| || || || Sbjct 601246 TCTTTGAGGTATTGGCCACCGCCGGTGACACCCACTTGGGTGGTGAGGACTTTGA 601300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861807923840