Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq54 360 3e-94
seq36 206 3e-48
seq20 199 5e-46
seq55 187 3e-42
seq45 111 2e-19
>seq54
Length=1443984
Score = 360 bits (398), Expect = 3e-94
Identities = 928/1405 (66%), Gaps = 14/1405 (1%)
Strand=Plus/Plus
Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535
|| || ||||| || || ||||| || ||||| || |||| | ||| | |||||
Sbjct 1395903 AACACCGTCTTCGATGCCAAGCGACTCATTGGCCGAAAGTGGGCCGATCCCGAGGTCCAG 1395962
Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATT 195595
||| || ||| ||||| | | | ||||| || || ||||| || ||
Sbjct 1395963 TCCGACATGAAGCACTGGCCCTTCAAGGTTGT---CGACAAGGGAACCAAGCCCATCATC 1396019
Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655
| || || | | || |||| || || || | ||||| ||||| ||||| ||| |
Sbjct 1396020 GAGGTCGAGTACCGAGGCGAGACCAAGCAGTTCACCCCCGAGGAAATCTCGTCCATGATC 1396079
Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715
|| | ||||||||||||||||| || | | | | || | || || | || ||
Sbjct 1396080 CTGCTCAAGATGAAGGAGACTGCTGAGGCCTACCTCGGCACGACCGTCTCCAACGCTGTC 1396139
Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775
|| ||||| || || ||||||| || || || ||||| || || ||||| || | ||
Sbjct 1396140 GTCACTGTCCCCGCCTACTTCAACGACTCGCAGCGACAAGCCACCAAGGATGCCGGTGTC 1396199
Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835
|| ||||||||||| || | || ||||| || || || || || || || |||||
Sbjct 1396200 ATCTCGGGTCTAAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCTTAC 1396259
Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| || |||||||| | || || || || || || | ||||| |||||||| || ||
Sbjct 1396260 GGCCTCGACAAGAAGACGGTCGGCGAGAAGAACGTCCTCATCTTCGATCTCGGAGGAGGA 1396319
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
||||| ||||| || ||| | | || || | ||||| ||||| || ||||| || ||
Sbjct 1396320 ACGTTCGATGTGTCCCTTTTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCC 1396379
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT-GTCTGA 196014
||||| || || | || ||||| || ||||| || || || || || ||| |
Sbjct 1396380 GGTGACACCCACTTGGGAGGTGAGGACTTCGACAACCGACTCGTCACCCACTTCGTC-GC 1396438
Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTC-TGGAAATCCTAGGGCTCTTCGTCGGC 196073
|||||| || ||||| ||||| ||| | || | ||| || | ||||| ||||| |
Sbjct 1396439 CGAGTTCAAGCGCAAGAACAAGAAGGATCTCTCGTCGAACGCCC-GTGCTCTCCGTCGTC 1396497
Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133
| | || || || || |||||||| || || || ||||| | || || || | | |
Sbjct 1396498 TCCGCACCGCCTGCGAGCGTGCCAAGCGCACCCTTTCTTCGGCCGCCCAGACCACCATCG 1396557
Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193
|||| || ||| | || || || || |||||||| || |||| ||||| || || || |
Sbjct 1396558 AGATCGACTCGCTTTTCGAGGGTATCGACTTCTACACCTCTATCACCCGCGCCCGCTTCG 1396617
Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253
| ||||| | || ||||| | ||||| || || || | || || || |
Sbjct 1396618 AGGAGTTGTGCCAAGACTTGTTCCGTGGCACCATGGACCCCGTCGAGAAGGTCCTCCGCG 1396677
Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313
|| | ||||| || ||| | || | || || ||||| || || || || || ||||
Sbjct 1396678 ACTCCAAGATCGACAAGGCCTCTGTCCACGAGATCGTCCTCGTCGGTGGGTCCACTCGTA 1396737
Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373
| || ||| | || | | | || |||||||| || || ||||| | |
Sbjct 1396738 TCCCCAAGGTCCAGAAACTCGTCTCGGACTTCTTCAGCGGCAAGGAGCCTAACAAGTCCA 1396797
Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433
||||||| ||||| || ||||| || ||||| || || |||||||| || ||| | ||||
Sbjct 1396798 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCTGTCCAGGCTGCCATCCTCACCGGTG 1396857
Query 196434 TTGACAATA---ATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490
||| | || ||| || | || | || ||||| || || | || |
Sbjct 1396858 ---ACACGTCCGAGAAGACCCAGGACTTGCTCTTGCTCGATGTGGCCCCGCTCTCGACCG 1396914
Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550
|| | || || || |||||||||||||| || | ||| | ||||| || | || |
Sbjct 1396915 GTATCGAGACCGCCGGTGGTGTTATGACCAAGCTCATTCCCCGCAACACGACCGTCCCTA 1396974
Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610
| |||||| | ||| || || || |||| || ||||| |||||| || || |
Sbjct 1396975 CCAAGAAGTCCGAGACCTTCTCGACCTACGCCGACAACCAACCCGGTGTTTTGATCCAGG 1397034
Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670
| || || || || || |||| ||||||| ||| | || || || | ||||| |
Sbjct 1397035 TCTACGAGGGTGAGCGTGCCCGCACAAAGGACAACAACCTCCTCGGCAAGTTCGAGCTTT 1397094
Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730
| || || || | || ||| | |||||||| ||| | | || |||||| || || |
Sbjct 1397095 CCGGCATCCCCCCCGC-CCCCGTGGTGTTCCGCAGGTCGAAGTCACCTTCGACATTGATG 1397153
Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790
| || || ||||| |||||| | || | |||||| | | ||||| || | |||||
Sbjct 1397154 CCAACGGTATTCTCAACGTCTCCGCCGCCGACAAGACAACCGGCAAGTCCAACAAGATCA 1397213
Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850
|| | || |||||||| || || |||||| || || || |||||||| | || |
Sbjct 1397214 CTATCTCGAACGACAAGGGTCGCCTCAGTAAGGACGAGATCGAGCGTATGGTGCGCGAAG 1397273
Query 196851 CGGAAAAGTACAGGGAAGAAGACGA 196875
| || | || | | | ||||| ||
Sbjct 1397274 CCGAGCAATATAAGCAGGAAGATGA 1397298
>seq36
Length=1841281
Score = 206 bits (228), Expect = 3e-48
Identities = 183/229 (80%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171863 TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAG 171922
|||||||||| || || ||||| || || || || |||||||||||||| |||||||| |
Sbjct 1559913 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1559854
Query 171923 ACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGC 171982
|||| ||||| ||| |||| ||||||| || || ||||||||||| || ||||| ||||
Sbjct 1559853 ACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGC 1559794
Query 171983 AACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACG 172042
|||| || || ||||| || || ||||| || ||||| || || ||||| |||||||||
Sbjct 1559793 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACA 1559734
Query 172043 TTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091
| ||||||||||| || || ||| | || || | || || ||||||||
Sbjct 1559733 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGC 1559685
>seq20
Length=1456699
Score = 199 bits (220), Expect = 5e-46
Identities = 184/233 (79%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || ||||| || || || |||||||||||||| ||||
Sbjct 789384 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 789443
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| || |||| ||||||||||||| |||||||||||||| || |
Sbjct 789444 CCTCGGACACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAG 789503
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| ||| | || || || || || ||||| || ||||| || || ||||| ||||
Sbjct 789504 ACCAGCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 789563
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| |||| |||||||| || || ||| | || || | || || ||||||
Sbjct 789564 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGTCTCCGTGGTGGT 789616
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||||||||| || ||| | || || || || ||||| || ||||||||||| ||
Sbjct 546782 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 546841
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| | || || |||||||| |||||||| |||||||| || || ||
Sbjct 546842 GACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAA 546901
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| || || || || || || ||||| || ||||| ||||| ||||| |||||||||
Sbjct 546902 CAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAAC 546961
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || ||| | || || | || || ||||||
Sbjct 546962 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGCCTCCGAGGTGGT 547009
Score = 187 bits (206), Expect = 3e-42
Identities = 181/233 (78%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || ||||| || || || |||||||||||||| ||||
Sbjct 789156 GTGGTATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 789215
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| || || || |||| ||||||| ||||| ||||| || ||||| || |
Sbjct 789216 CCTCGGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAG 789275
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| || ||||| || || ||||| || || ||||| || ||||| || || ||||| ||||
Sbjct 789276 ACCAACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATT 789335
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| |||| |||||||| || || ||| | || || | || || ||||||
Sbjct 789336 ACAACATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGTGGTGGT 789388
Score = 185 bits (204), Expect = 1e-41
Identities = 171/217 (79%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || ||| | || || || || ||||| |||||||||||||
Sbjct 547005 GTGGTATGCAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGT 547064
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| ||| |||| ||||||||||| || ||||| |||||||| || |
Sbjct 547065 CCTCGGACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAG 547124
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| || ||||| || || || || || || ||||| || ||||| ||||| ||||| || |
Sbjct 547125 ACCAACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACT 547184
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
||||| | || |||||||| || || ||| | || ||
Sbjct 547185 ACAACATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 547221
Score = 178 bits (196), Expect = 2e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || ||| | || || || || |||||||||||||| ||||| ||
Sbjct 788933 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 788992
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| || || || |||| ||||||| ||||| ||||| || ||||| || || ||
Sbjct 788993 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789052
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| || || ||||| || || ||||| || ||||| || || ||||| |||||||||
Sbjct 789053 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789112
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|||| |||||||| || || ||| | || || | || || ||||||
Sbjct 789113 ATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGGT 789160
>seq55
Length=539833
Score = 187 bits (206), Expect = 3e-42
Identities = 177/226 (78%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923
||||||||| || || || ||||| || || || |||||||||||||| |||||||| ||
Sbjct 107307 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 107366
Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCA 171983
||| ||||| ||| |||| ||||||| ||||| ||||||||||| || || || |||||
Sbjct 107367 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 107426
Query 171984 ACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGT 172043
||| || || || || || || ||||| || ||||| || ||| | || || |||||| |
Sbjct 107427 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 107486
Query 172044 TCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||||||||| || || ||| | || || | || || ||||||
Sbjct 107487 CCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGAGGTGGT 107532
>seq45
Length=1665130
Score = 111 bits (122), Expect = 2e-19
Identities = 240/355 (68%), Gaps = 3/355 (1%)
Strand=Plus/Plus
Query 195633 CCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGG 195692
|||| || || ||| | ||| | ||| |||||||||||||| || || | | | |||
Sbjct 600949 CCGAGGAGATCTCGGCCATGATCTTGGGCAAGATGAAGGAGACCGCCGAGGCCTACTTGG 601008
Query 195693 GTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGAC 195752
| || | || | | || || || || || || || ||||||| || | |||||||
Sbjct 601009 GCAAGAAGGTCACCCACGCCGTCGTCACCGTCCCGGCCTACTTCAACGACGCTCAACGAC 601068
Query 195753 AGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAAC 195812
| ||||| |||||||| | | || || ||||| || ||| | | | || || |
Sbjct 601069 AAGCGACCAAGGACGCCGGCACGATCGCCGGTCTCAATGTTCTCCGTGTCGTTAACGAGC 601128
Query 195813 CAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTAT 195872
| || || || || || || || ||||| ||||||| | | || || || || ||
Sbjct 601129 CCACCGCCGCCGCGATCGCCTACGGTCTCGACAAGACCGGTGGCG-AGCGCAACAT-CAT 601186
Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932
| ||| |||||||| || || ||||| |||||||| || ||| || || | |||
Sbjct 601187 CG-TCTACGATCTCGGGGGGGGAACGTTCGATGTCTCGCTCCTCTCGATCGAGGACGGTG 601245
Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| || || ||| ||| || || ||||| || || | |||||||| || || ||
Sbjct 601246 TCTTTGAGGTATTGGCCACCGCCGGTGACACCCACTTGGGTGGTGAGGACTTTGA 601300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861807923840
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