Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 3e-15 seq47 86.0 2e-11 >seq20 Length=1456699 Score = 98.7 bits (108), Expect = 3e-15 Identities = 131/178 (74%), Gaps = 12/178 (7%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct 1320727 CCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGCGAT 1320786 Query 251548 CTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGCTA 251601 | |||||| | || || || || |||| | | | |||||| | | ||| | | Sbjct 1320787 CGACCCTCCACGGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTGAA 1320844 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 | ||| || || ||||| ||||||||||| |||||| ||| ||||| | | ||| Sbjct 1320845 TTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACCAAGGTAGA 1320898 >seq47 Length=1274950 Score = 86.0 bits (94), Expect = 2e-11 Identities = 186/275 (68%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603 |||||| ||| || ||| ||| | ||||| | ||||| | |||||| ||||| Sbjct 810129 TACGGTGCCATCGTATGCAACCATGACATCTTCGAGCGCCTTGACGAGACGACGTTGAAT 810188 Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663 || || || || || || || || ||||| || | || | || || |||| || Sbjct 810189 GTACCCCGTCTCAGCCGTCTTGACGGCCGTATCGATCAATCCTTCTCGTCCGGCCATGGC 810248 Query 302664 ATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCA 302721 |||||||| | ||||| |||| || | || | ||| | | || | || |||||||| Sbjct 810249 GTGGAAGAAGAACTCTTGCGGT-GTCAAACCTCGCAAGTACG-AGTTTTCGACGAAACCC 810306 Query 302722 CGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCG 302781 | ||| |||||||| | ||| |||||||||||| |||| ||| | | || | || Sbjct 810307 CTCGCTTCGGGCGAGTAATCGTCCTTGGTAAAGTGGGGCAAGGTACGATGCTTGAACCCA 810366 Query 302782 TATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 | || | ||| || || || ||| |||| || || Sbjct 810367 AACGGCACACGTTTGCCCTCGACGATCTGTTGCCC 810401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816242248264