Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq20 98.7 3e-15
seq47 86.0 2e-11
>seq20
Length=1456699
Score = 98.7 bits (108), Expect = 3e-15
Identities = 131/178 (74%), Gaps = 12/178 (7%)
Strand=Plus/Plus
Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547
||||| || ||||| ||||||||||||||||| |||||||||||||||||||| || |
Sbjct 1320727 CCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGCGAT 1320786
Query 251548 CTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGCTA 251601
| |||||| | || || || || |||| | | | |||||| | | ||| | |
Sbjct 1320787 CGACCCTCCACGGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTGAA 1320844
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
| ||| || || ||||| ||||||||||| |||||| ||| ||||| | | |||
Sbjct 1320845 TTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACCAAGGTAGA 1320898
>seq47
Length=1274950
Score = 86.0 bits (94), Expect = 2e-11
Identities = 186/275 (68%), Gaps = 4/275 (1%)
Strand=Plus/Plus
Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603
|||||| ||| || ||| ||| | ||||| | ||||| | |||||| |||||
Sbjct 810129 TACGGTGCCATCGTATGCAACCATGACATCTTCGAGCGCCTTGACGAGACGACGTTGAAT 810188
Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663
|| || || || || || || || ||||| || | || | || || |||| ||
Sbjct 810189 GTACCCCGTCTCAGCCGTCTTGACGGCCGTATCGATCAATCCTTCTCGTCCGGCCATGGC 810248
Query 302664 ATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCA 302721
|||||||| | ||||| |||| || | || | ||| | | || | || ||||||||
Sbjct 810249 GTGGAAGAAGAACTCTTGCGGT-GTCAAACCTCGCAAGTACG-AGTTTTCGACGAAACCC 810306
Query 302722 CGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCG 302781
| ||| |||||||| | ||| |||||||||||| |||| ||| | | || | ||
Sbjct 810307 CTCGCTTCGGGCGAGTAATCGTCCTTGGTAAAGTGGGGCAAGGTACGATGCTTGAACCCA 810366
Query 302782 TATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
| || | ||| || || || ||| |||| || ||
Sbjct 810367 AACGGCACACGTTTGCCCTCGACGATCTGTTGCCC 810401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816242248264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |