Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq36 123 2e-23
seq55 118 1e-21
seq20 118 1e-21
>seq36
Length=1841281
Score = 123 bits (136), Expect = 2e-23
Identities = 165/227 (73%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||| ||||| | || || || || || || || || || ||||| || || | |||
Sbjct 1559913 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1559854
Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||| | || |||| || || || |||||| ||||| ||||| || || ||||| ||
Sbjct 1559853 ACACGATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 1559795
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | ||||||||||| || ||||| |||||| | | | | ||||| |||
Sbjct 1559794 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 1559735
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || ||||||||| | || |||| || ||
Sbjct 1559734 ATCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGG 1559688
>seq55
Length=539833
Score = 118 bits (130), Expect = 1e-21
Identities = 153/209 (73%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765
||| ||||| | || || || || || || || || || ||||| || || | ||||
Sbjct 107307 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 107366
Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
||| | || |||| || || || |||||||||||| ||||| || || || || || |
Sbjct 107367 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCCCCAGACCAGC 107425
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
||||| | ||||| ||||| || ||||| |||||| | | | || | || || ||||
Sbjct 107426 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 107485
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTG 24913
| |||||||| ||||| || |||||||||
Sbjct 107486 TCCAAAAGGAGTCGACCCTCCACTTGGTG 107514
>seq20
Length=1456699
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| ||||| | || || | ||||| || || || || ||||| || || || |
Sbjct 788932 GATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 788991
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 788992 GGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 789051
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||| | |||||||| || || ||||| |||||| | | | | ||||| ||
Sbjct 789052 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 789111
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| ||||| || ||||||||| | || | ||||| ||
Sbjct 789112 CATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGG 789159
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| || || || || || || ||||| || || || |
Sbjct 789161 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789220
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || |||
Sbjct 789221 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789280
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || ||||| |||||| | | | | ||||| |||
Sbjct 789281 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789340
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| ||||| ||||| || |||||||||
Sbjct 789341 ATTCAGAAGGAGTCGACGCTCCACTTGGTG 789370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897195092160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |