Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq20 118 7e-22 seq55 113 3e-20 seq36 111 1e-19 >seq20 Length=1456699 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||||||||| || |||| || |||| |||| Sbjct 789601 CAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATC 789542 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| ||| ||||||||| | || | || |||||||| Sbjct 789541 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 789482 Query 34885 GTTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 || | | || || ||||| | |||| || || |||||| || | ||| || | Sbjct 789481 -TTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCG 789423 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| || ||||| || ||||| ||||| Sbjct 789422 TCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || |||| || |||| |||| || || ||||| || || || Sbjct 789124 CTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 789065 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || ||||| Sbjct 789064 GATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATT 789005 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | ||| |||||||| || || | |||||| || Sbjct 789004 GTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 788945 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 788944 GAAGATTTGCAT 788933 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || |||| || |||| |||| || || ||||| || || || Sbjct 789352 CTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 789293 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || ||||| Sbjct 789292 GATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATT 789233 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | ||| || ||||| ||||| || ||||| || Sbjct 789232 GTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGAC 789173 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 789172 GAAGATTTGCAT 789161 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| | || | || |||| || || ||||| || ||||| Sbjct 547201 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAA 547142 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || |||||| Sbjct 547141 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 547082 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || ||| || || | || || ||||| || || | |||||| || Sbjct 547081 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGAC 547022 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 547021 GAAGATTTGCAT 547010 >seq55 Length=539833 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||| | | | |||| |||| Sbjct 107516 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 107457 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || |||||||||||| | || | || |||||||| Sbjct 107456 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 107397 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 107396 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 107337 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || ||||| || ||||| || ||||| ||| |||| Sbjct 107336 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTGAT 107302 >seq36 Length=1841281 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| || |||| || |||| |||| || || ||||| ||||| || Sbjct 1559723 CTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 1559782 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||||||||| | || | || |||||||| | || || |||||| Sbjct 1559783 GATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTT 1559842 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | ||| |||||||| |||||||||||||| || Sbjct 1559843 GTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1559902 Query 34966 AAAGATCTGCA 34976 ||||| |||| Sbjct 1559903 GAAGATTTGCA 1559913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692514204568